Gene Information

Name : PSJM300_09140 (PSJM300_09140)
Accession : YP_006524252.1
Strain : Pseudomonas stutzeri DSM 10701
Genome accession: NC_018177
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1968737 - 1969462 bp
Length : 726 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
TTGGCCGTCGTGTTCGAGCGATTCCAACCCATGCATGTATTGCTGACAGAAGACAACGCGCTCATCGCCAGCGGCATCGT
CGCCGGGCTCCAGGCCCAGGGATTCGCCGTGGCCCATGCCGCCACGGCGGCACAGGCCGATGCGCTGCTGCGCAGTGCTC
GCTTCGATCTGCTGATTCTCGACCTGGGGCTGCCCGACGAAGATGGCCTGCATTTTCTCCAGCGCCTGCGCCGGCGCGGG
ATCGACCTGCCGGTGCTGATTCTGACCGCCCGCGATGCGGTGACCGAACGCGTCTCGGGCCTGCAGGCGGGCGCCGACGA
CTATCTGGTCAAACCCTTCGATCTGCGAGAACTCGCCGCCCGCCTGCATGCGCTGCTGCGCCGGGCGGCCGGGCGCACCA
CCCACCTCGTCGAACACGGATCGCTCACCTACGACCCGGCCGCCTGCACGACCTTCCTCGCGGGTCAGCCCGTCGAGCTG
TCCCGCCGTGAGCAGGCGTTGCTGCAGGCGCTTCTGCACAATCCAGGCCGCGTGCTATCCGCCGAGCAGCTGAAGGATGC
GGTGTACGGGCTGGGCGAGGACGTCGAGAGCAACGCGCTGAACGTGCACATCCATTACCTGCGCAGAAAGCTCGGCAACG
GCATCGTCGAGACGGTAAGGGGGCTGGGTTATCGCCTGGGAACCGCCGGGCACGGGTCTGCCCCAACCCGGGAAGCCGAC
TCGTGA

Protein sequence : 
MAVVFERFQPMHVLLTEDNALIASGIVAGLQAQGFAVAHAATAAQADALLRSARFDLLILDLGLPDEDGLHFLQRLRRRG
IDLPVLILTARDAVTERVSGLQAGADDYLVKPFDLRELAARLHALLRRAAGRTTHLVEHGSLTYDPAACTTFLAGQPVEL
SRREQALLQALLHNPGRVLSAEQLKDAVYGLGEDVESNALNVHIHYLRRKLGNGIVETVRGLGYRLGTAGHGSAPTREAD
S

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-40 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSJM300_09140 YP_006524252.1 two component transcriptional regulator BAC0487 Protein 2e-27 46
PSJM300_09140 YP_006524252.1 two component transcriptional regulator NC_002516.2.879194.p Protein 1e-18 43
PSJM300_09140 YP_006524252.1 two component transcriptional regulator BAC0083 Protein 4e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSJM300_09140 YP_006524252.1 two component transcriptional regulator VFG0473 Protein 6e-31 44
PSJM300_09140 YP_006524252.1 two component transcriptional regulator VFG1386 Protein 1e-16 42
PSJM300_09140 YP_006524252.1 two component transcriptional regulator VFG1390 Protein 5e-20 41