Gene Information

Name : fliP (PSJM300_00890)
Accession : YP_006522618.1
Strain : Pseudomonas stutzeri DSM 10701
Genome accession: NC_018177
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 189801 - 190553 bp
Length : 753 bp
Strand : -
Note : COG1338 Flagellar biosynthesis pathway, component FliP

DNA sequence :
ATGAAACAGCGACGCGGGTTGCTGCTGGTCCTGTTGCTGGCCTGCCTGTTCCCCCTGGCCGCACAGGCGGCGGGAGGCGA
GATCACCCTGTTCAGCCTGAACGATACCGAGAACGGCCAGGATTTCAGCGTCAAGCTGCAGATCCTGATCATCATGACGC
TGCTCGGCTTCCTGCCGGCGATGCTGATGATGATGACCTGCTTCACGCGCTTCATCATCGTCCTGGCCATCCTGCGCCAG
GCCATCGGCCTGCAGCAGAGCCCGCCCAACCAGGTGCTGATCGGCATCGCGCTGATCGTCACGCTGCTGGTAATGCGCCC
GGTCTGGCAGGAAATTCACGACACGGCCTTCGAGCCTTTCCAGAACGACGAGATCAGCCTGGAGCAGGCGCTGGAGGTTT
CCAAGGAGAGCCTTTCCGGCTTCATGCTGGCGCAGACCAACAAGTCTTCGTTGGAAACCATGGTGTCGCTTGCCGGCGAG
GAGATTCCGGAGAACCTCGAGGAGCTGGATTTTTCGCTGCTGCTGCCTGCGTTCGTGCTGAGCGAGCTGAAAACCGCGTT
TCAGCTGGGATTCATGATCTTCATGCCCTTCCTGGTGATCGATCTGGTGGTCGCCAGTGTGCTGATGGCGATGGGCATGA
TGATGCTGTCGCCGATGATGATTTCGCTGCCGTTCAAGTTGATGGTGTTCGTGTTGGTCGATGGCTGGGCGCTGTTGATG
GGCACGCTGACTACCAGTATTCAGCCGTTCTAG

Protein sequence :
MKQRRGLLLVLLLACLFPLAAQAAGGEITLFSLNDTENGQDFSVKLQILIIMTLLGFLPAMLMMMTCFTRFIIVLAILRQ
AIGLQQSPPNQVLIGIALIVTLLVMRPVWQEIHDTAFEPFQNDEISLEQALEVSKESLSGFMLAQTNKSSLETMVSLAGE
EIPENLEELDFSLLLPAFVLSELKTAFQLGFMIFMPFLVIDLVVASVLMAMGMMMLSPMMISLPFKLMVFVLVDGWALLM
GTLTTSIQPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 7e-18 41
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 2e-18 41
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 2e-18 41
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 2e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_006522618.1 flagellar biosynthesis protein FliP VFG2016 Protein 1e-45 58
fliP YP_006522618.1 flagellar biosynthesis protein FliP VFG1259 Protein 2e-45 58
fliP YP_006522618.1 flagellar biosynthesis protein FliP VFG2338 Protein 1e-39 54
fliP YP_006522618.1 flagellar biosynthesis protein FliP VFG2494 Protein 5e-43 52
fliP YP_006522618.1 flagellar biosynthesis protein FliP VFG0044 Protein 4e-19 42
fliP YP_006522618.1 flagellar biosynthesis protein FliP VFG0394 Protein 3e-19 42