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Name : PSJM300_07980 (PSJM300_07980) Accession : YP_006524024.1 Strain : Pseudomonas stutzeri DSM 10701 Genome accession: NC_018177 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : - COG ID : - EC number : - Position : 1705340 - 1707064 bp Length : 1725 bp Strand : + Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGACTCAGGACATGCGCCAGCGCAAGGTTCGCCTCGGCGACCTGCTGGTCCAGGCCGGGCTGATCAGTGACGCCCAACT GCAGCTGGCCCTGCAGGACCAGAAACGCAGTGGCTCGAAGCTCGGCCGCACGGTGCTCGATCTGGGCTTCATCGACGAGG TGCGCCTGCTCACGGCGTTGTCCGAGCAGCTGCAGATTCCCTTCGTCGAGCTCAAGCACTACAAGTTCGACAACCAGCTG ACCCAGAGCCTGCCCGAAGCCGTGGCGCGGCGTTTTCGCGTCATCGTGCTGTCCCGCCAGGGCGATGGTTTGCTGGTGGG CATGTCCGATCCGCTCGACCTGTTCGCCCAGGACGAGATGGAACGCCTGCTGGGCAAGCGCGTGTATCCGGCGGTGGTGC GCGAAAGCGAACTGCTCGGTGCGCTGGATCGGCTCTACCGGCGCACCAGCGAGATCGCTTCGCTGGCCGGCGAGCTGGAG GGCGACCTGCAGGACAGCGATTTTGACCTCGCGCGTCTGGGCGCGGAGAGCAACAGCGACGCGCCGGTGGTGCGCCTGCT GCAGACGCTGTTCGAAGACGCCGTGCAGATGAAGGCCTCGGACATCCATATCGAGCCGGACGAGGGCGTGGTGCGCATCC GCCAGCGCATCGACGGCGTGCTCAACGAACAGGTGATGAAGGAGCAGCGGGTCGCTTCGGCGCTGGTCATGCGTCTGAAG ATCATGTCCGGCCTGGATATCTCGGAAAAGCGCCTGCCGCAGGACGGCCGCTTCAACATTCGCGTGAAGAACCGCAGCCT CGACGTGCGCGTCTCGACCATGCCGGTGCAGTTCGGCGAATCGGTGGTGATGCGTCTGCTCGACCAGAGCGGCGCGATGT TCCAGCTCGAAGGCACCGGCATGCCGCCGGCCATGCTCGAGCGCTTCCGCCGCCTGCTGCAGCGCCCGCACGGCATGGTG CTGGTCACCGGCCCCACCGGCTCGGGCAAGACGACGACGCTCTACGCCGGCCTGTCCGAGCTGAACAGTCCGGAAAAGAA GATCATCACCGTGGAAGACCCGGTGGAATATCGGCTGCCGCGCATCAATCAGGTGCAGGTCAACGCCAAGATCGAGCTGA CCTTTGCACGCGTGCTGCGCGCCGCCCTGCGCCAGGACCCGGACATCGTGCTGGTGGGCGAGATCCGTGACCAGGAAACC GCCGAGATCGCCCTGCGTGCCGCGCTCACCGGCCACCTGGTGCTTTCGACCCTGCACACCAACGACGCACTGACTTCGGC GATGCGCCTGATCGACATGGGCGTCGAGCCTTTCCTGGTCGCCACCGCGCTCAACGCCGTGCTGGCCCAGCGCCTGATCC GTCGCGTGTGCGAAAACTGCCTCGAAGACCACCAACCCGATCCACGGCAGATCGCCTGGCTCGAAAACCTCTACGGCCAA TCGCTGGCGGGCATGCGCTTCAAGCGTGGCAGCGGTTGTCACCATTGCCACAACACCGGCTACAGCGGCCGGGTTGGCGT CTATGAACTGCTGGAACTGGACGAGCCGATGATCGCCGCCCTGCGCCGTGGCGACCCCCAGGGTTTCGCCGAAGCCGCAC GCCAGCAGCCGCACTATCGGCCACTGGCCGCCAGCGCCCTGGACTATGCCATCGCCGGCATCACCAGCGTCGATGAGGTG CTGAAAGTCTGCGCCACCCTGGCCGACGATGAGGTGAGCGCGTGA Protein sequence : MTQDMRQRKVRLGDLLVQAGLISDAQLQLALQDQKRSGSKLGRTVLDLGFIDEVRLLTALSEQLQIPFVELKHYKFDNQL TQSLPEAVARRFRVIVLSRQGDGLLVGMSDPLDLFAQDEMERLLGKRVYPAVVRESELLGALDRLYRRTSEIASLAGELE GDLQDSDFDLARLGAESNSDAPVVRLLQTLFEDAVQMKASDIHIEPDEGVVRIRQRIDGVLNEQVMKEQRVASALVMRLK IMSGLDISEKRLPQDGRFNIRVKNRSLDVRVSTMPVQFGESVVMRLLDQSGAMFQLEGTGMPPAMLERFRRLLQRPHGMV LVTGPTGSGKTTTLYAGLSELNSPEKKIITVEDPVEYRLPRINQVQVNAKIELTFARVLRAALRQDPDIVLVGEIRDQET AEIALRAALTGHLVLSTLHTNDALTSAMRLIDMGVEPFLVATALNAVLAQRLIRRVCENCLEDHQPDPRQIAWLENLYGQ SLAGMRFKRGSGCHHCHNTGYSGRVGVYELLELDEPMIAALRRGDPQGFAEAARQQPHYRPLAASALDYAIAGITSVDEV LKVCATLADDEVSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-82 | 43 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-83 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSJM300_07980 | YP_006524024.1 | type II secretion system protein E | VFG1876 | Protein | 1e-87 | 45 |
| PSJM300_07980 | YP_006524024.1 | type II secretion system protein E | VFG0182 | Protein | 6e-85 | 45 |
| PSJM300_07980 | YP_006524024.1 | type II secretion system protein E | VFG2048 | Protein | 6e-83 | 43 |
