|
Name : PSJM300_00770 (PSJM300_00770) Accession : YP_006522596.1 Strain : Pseudomonas stutzeri DSM 10701 Genome accession: NC_018177 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 166503 - 167717 bp Length : 1215 bp Strand : + Note : COG1459 Type II secretory pathway, component PulF DNA sequence : ATGGCGGCCTTTGAGTATGTCGCGCTGGATCCGCGCGGCCGACAGCAGAAGGGCCTGATCGAGGCGGACAGTCCGCGCCA GGCCCGCCAGTTGCTGCGCGACAAGCAGTGGTCGCCGCTGGAGGTCAAGCAGGCCCGTGCCAGGGAAAGCGCCGGCACCG GCGGTTTCAGTTTCGGCCGCGGTCTCTCGGCACGCGACCTGGCGTTGGTCACCCGCCAGCTGGCGACGCTGGTGCAGGCT GCGCTGCCGATCGAGGAAGCGCTGCGCGCTGCGGCGGCGCAATCCGGCTCGCAGAAGATCAAGTCGATGCTGCTGGCGGT GCGTGGGCGGGTCATGGAAGGTCACAGCCTGGCCGCTTCCCTGCGCGAATACCCCTCGGCCTTTCCCGAGCTGTACCGCG CCACGGTGGCCGCCGGCGAGCACGCCGGGCACCTCGGGCTGGTGCTCGACCAGCTGGCCGACTACACCGACCAGCGCCAG CAGTCGCGGCAGAAGATCCAGCTGGCGCTGCTCTACCCGGTGATCCTGCTGGTGGCCTCGCTGGCCATCGTGGTGCTGCT GCTGGGCTACGTGGTGCCGGACGTGGTCAAGGTCTTCGTCAACACCGGCCAGGAGTTGCCAGCGCTGACCACCGGCCTGA TCGCCGTCAGCGAGGTGGTGCAGCGCTGGGGCTGGCTGATCATGCTGGGCATCGTCGCGCTGGCCATCGGCATGCGCCAG GCATTGCGCGACCCGAGCATCAAGCTGCGCTGGCACAGCTTCATCCTGCGGCTGCCGCTGGTCGGGCGGCTGGTGCGGGC GACCAACACCGCGCGCTTCGCCTCGACCCTGGCGATCCTCACCCGCAGTGGCGTGCCGCTGGTGGATGCGCTGGGCATCG CCGCCGCGGTGATCGGCAACCTGCGCATTCGTGAGCGCGTGGTCGAGGCGGCGCAACGCGTGCGTGAAGGCGGCAGCCTG ACCCGTGCGCTGGAGGCCACCGGCGAATTTCCGCCGATGATGCTGCACATGATCGCCGCCGGCGAGAAGTCCGGCGAACT CGACCAGATGCTGGCGCGCACCGCGCGCAATCAGGAGAACGACCTGGCCGCGCAGATTTCCCTGCTGGTCGGGCTGTTCG AGCCGTTCATGCTGGTGTTCATGGGGGCGGTGGTGCTGGTCATCGTGCTGGCCATCCTGCTGCCGATCCTTTCTCTCAAC CAACTGGTGGGCTAG Protein sequence : MAAFEYVALDPRGRQQKGLIEADSPRQARQLLRDKQWSPLEVKQARARESAGTGGFSFGRGLSARDLALVTRQLATLVQA ALPIEEALRAAAAQSGSQKIKSMLLAVRGRVMEGHSLAASLREYPSAFPELYRATVAAGEHAGHLGLVLDQLADYTDQRQ QSRQKIQLALLYPVILLVASLAIVVLLLGYVVPDVVKVFVNTGQELPALTTGLIAVSEVVQRWGWLIMLGIVALAIGMRQ ALRDPSIKLRWHSFILRLPLVGRLVRATNTARFASTLAILTRSGVPLVDALGIAAAVIGNLRIRERVVEAAQRVREGGSL TRALEATGEFPPMMLHMIAAGEKSGELDQMLARTARNQENDLAAQISLLVGLFEPFMLVFMGAVVLVIVLAILLPILSLN QLVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 9e-65 | 48 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-65 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSJM300_00770 | YP_006522596.1 | general secretion pathway protein F | VFG0181 | Protein | 4e-126 | 77 |
| PSJM300_00770 | YP_006522596.1 | general secretion pathway protein F | VFG2049 | Protein | 7e-65 | 48 |
| PSJM300_00770 | YP_006522596.1 | general secretion pathway protein F | VFG1870 | Protein | 3e-69 | 42 |
