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Name : PSJM300_00765 (PSJM300_00765) Accession : YP_006522595.1 Strain : Pseudomonas stutzeri DSM 10701 Genome accession: NC_018177 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 164793 - 166361 bp Length : 1569 bp Strand : + Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGTCATCCCTCGAAGGTACGTTGACGCCCGCCCGCCTGCCCTTCGCTTTCGCCAGACGCCACGGGGTTTTCCTGCGCGA TGGCGAAAGCGGCCTGCGGCTGTGCGCCCGTGAAGGCGCGCCGCTGACGGCGCTGCAGGAAGCGCAGCGCGTGGCTGGTG GCCCCCTGCCTATGCAGTGGCTGACGCCGGAGGCGTTCGACGAGGCGTTGGGCAACGCCTATCAGCACGACTCTTCCGAC GCCATGCTGATGGTCGAAGGGTTGGGCAAGGACATGGATCTGCACAGCCTGGCCGACCATATCGAGAAGACCGAGGACCT GCTGGAGCAGGAGGACGACGCGCCGATCATCCGCCTGATCAATGCGCTGCTGGGCGAGGCGATCAGGGAGAACGCGTCCG ACATCCATGTCGAGACCTTCGAGAAGCGCCTGGTGATCCGCTTCCGGGTCGACGGCATCCTGCGCGAGGTGGTGCAGCCC AAGCGCGAACTGGCGGCGCTGCTGGTGTCGCGGATCAAGGTCATGGCGCGGCTGGACATTGCCGAGAAGCGCGTGCCTCA GGATGGGCGGATTTCCCTGCGGGTCGGTGGGCGCGAGGTCGATATCCGCGTGTCGACGCTGCCGTCGGCCAACGGCGAAC GGGTGGTGCTGCGCCTGCTCGACAAGCAGGCCGGGCGCCTGACCCTGCAGCACCTGGGCATGAGCGAGCGCGACCGCCAG CGAATGGAGCAGGCGGTAAAGAGGCCCCACGGCATCATCCTGGTCACCGGTCCCACCGGCTCGGGCAAGACCACCACCTT GTACGCCAGCCTGACCACGCTCAATGACCGCACCCGCAACATCCTCACCGTCGAGGATCCGATCGAATACAACCTCGAAG GCATTGGCCAGACCCAGGTCAACACCAAGGTCGACATGACCTTCGCCCGCGGACTGCGTGCCATCCTGCGCCAGGACCCG GATGTGGTGATGGTCGGCGAGATCCGCGACCAGGAGACCGCCGACATGGCGGTGCAGGCCTCGCTCACCGGCCACCTGGT GCTCTCCACGCTGCACACCAACAGCGCCATCGGTGCGGTGACGCGGCTGGTGGACATGGGCGTCGAGCCCTTCCTGATCT CCTCGTCGCTGCTCGGTGTGCTGGCCCAGCGCCTCGTGCGGGTGCTGTGTAATGACTGCAAACGCGCCTATGTCGCTGAC GAAGCCGAGTGTGCGCTGTTCGGCATCGACCCGAGCGAGGCGCCAACGCTCTACCACGCCGAAGGTTGCGATGTGTGCCG CCAGCTGGGTTATCGCGGGCGGACCGGCATCTACGAGCTGGTGCTGTTCGACGACAGCCTGCGCAGCATGATTCATACCC GGGTGGCCGAGCAGGAAATGATCCGCCACGCGCGCGAGCTGGGGCCGAGCATCCGTGCCGATGGCCTGCGCAAGGTGCTC GAAGGCGTGACCACCATCGAAGAGGTGCTGCGTGTGACCAGCGATGACCGACGCTCCGGCCAGGGCGATCGCAGACAGGG CGGCGATCGCCGTGGCACTGCCCGTGACCGCAGGGCCACCGACCGATGA Protein sequence : MSSLEGTLTPARLPFAFARRHGVFLRDGESGLRLCAREGAPLTALQEAQRVAGGPLPMQWLTPEAFDEALGNAYQHDSSD AMLMVEGLGKDMDLHSLADHIEKTEDLLEQEDDAPIIRLINALLGEAIRENASDIHVETFEKRLVIRFRVDGILREVVQP KRELAALLVSRIKVMARLDIAEKRVPQDGRISLRVGGREVDIRVSTLPSANGERVVLRLLDKQAGRLTLQHLGMSERDRQ RMEQAVKRPHGIILVTGPTGSGKTTTLYASLTTLNDRTRNILTVEDPIEYNLEGIGQTQVNTKVDMTFARGLRAILRQDP DVVMVGEIRDQETADMAVQASLTGHLVLSTLHTNSAIGAVTRLVDMGVEPFLISSSLLGVLAQRLVRVLCNDCKRAYVAD EAECALFGIDPSEAPTLYHAEGCDVCRQLGYRGRTGIYELVLFDDSLRSMIHTRVAEQEMIRHARELGPSIRADGLRKVL EGVTTIEEVLRVTSDDRRSGQGDRRQGGDRRGTARDRRATDR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-141 | 61 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-141 | 61 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSJM300_00765 | YP_006522595.1 | general secretion pathway protein E | VFG0182 | Protein | 9e-178 | 78 |
| PSJM300_00765 | YP_006522595.1 | general secretion pathway protein E | VFG2048 | Protein | 4e-141 | 60 |
| PSJM300_00765 | YP_006522595.1 | general secretion pathway protein E | VFG1876 | Protein | 1e-134 | 57 |
| PSJM300_00765 | YP_006522595.1 | general secretion pathway protein E | VFG2426 | Protein | 6e-78 | 48 |
| PSJM300_00765 | YP_006522595.1 | general secretion pathway protein E | VFG0112 | Protein | 3e-84 | 47 |
| PSJM300_00765 | YP_006522595.1 | general secretion pathway protein E | VFG1880 | Protein | 9e-82 | 42 |
