Gene Information

Name : PSJM300_07035 (PSJM300_07035)
Accession : YP_006523839.1
Strain : Pseudomonas stutzeri DSM 10701
Genome accession: NC_018177
Putative virulence/resistance : Resistance
Product : O-succinylhomoserine sulfhydrylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1516694 - 1517905 bp
Length : 1212 bp
Strand : +
Note : COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases

DNA sequence :
ATGACTACTGAATGGGATGCCGGGCGGCTGGACAGTGATCTGCAAGGCGTCGGGCTCGATACCCTGGCGGTGCGCGCCGG
CCAGCATCGCACGCCCGAGTGCGAGCATGGCGAGGCGCTGTTCCTGACCTCGAGCTACGTCTATCGCAGCGCCGCCGAAG
CGGCCGCGCGGTTTTCCGGCGAGGTGCCGGGCAATGTCTATTCGCGCTACACCAACCCCACGGTGCGCGCCTTCGAAGAG
CGTATCGCCGCGATGGAAGGGGCCGAGCAAGCCGTCGCGACGGCTTCCGGCATGGCGGCGATCCTGGCGACGGTGATGAG
CCTGTGTTCGGCGGGCGATCACGTGCTGGTTTCGCGCAGCGTGTTCGGTGCCACCGTCTCGCTGTTCGACAAGTACCTGA
AGCGTTTCGGGCTCGAGGTCGACTATGTCCCACTCACCGAACCTGCTGCCTGGCAGGCGGCCTTCAAGGCCAATACTCGG
CTGGTATTCGTCGAGTCACCCTCCAATCCCCTGGCCGAGCTGGTGGACATCGCCGAACTGGCGCAGCTGTGCAAGGCCAA
GGGGGCGTTGCTGGCGGTGGATAACTGCTTCTGCACGCCCGTGCTGCAGCAACCTCTGGCGCTGGGTGCGGATATCGTGA
TCCATTCGGCAACCAAGTTCATCGACGGGCAGGGAAGGTGCCTGGGTGGCGTGGTTGCCGGTCGTGCCGAGCAGATGAAG
GAAGTGGTGGGGTTCCTGCGCACCTGTGGCCCGACGCTGAGCCCCTTCAATGCCTGGCTCTTTCTCAAGGGGCTGGAAAC
GCTGCGCCTGCGTATGCAGGCCCATTGCGCGAGCGCGCAGGCGCTGGCCGAATGGCTGGAGCAGCAGCCGGGTATCGAGC
GAGTGTATTACGCCGGGCTTCCCAGCCACCCCCAGCATGAACTGGCCAGGCGTCAGCAGAAGGGCTTTGGCGCTGTGCTC
AGTTTCGAAGTCAGCGGCGGCAAGGAAGGTGCCTGGCGTTTCATCGATGCGACGCGGTTGATTTCCATCACCGCGAATCT
GGGCGACAGCAAGACCACCATCACCCATCCCGCCACGACCACTCATGGCCGGCTGTCACCGGAAGACCGCACCAATGCGG
GTATTCGCGATAGCCTGATCCGTGTGGCGGTAGGCCTGGAAGACGTGGCGGATCTGCAAGCCGACCTGGCAAGAGGTTTG
GCAGCGCTCTGA

Protein sequence :
MTTEWDAGRLDSDLQGVGLDTLAVRAGQHRTPECEHGEALFLTSSYVYRSAAEAAARFSGEVPGNVYSRYTNPTVRAFEE
RIAAMEGAEQAVATASGMAAILATVMSLCSAGDHVLVSRSVFGATVSLFDKYLKRFGLEVDYVPLTEPAAWQAAFKANTR
LVFVESPSNPLAELVDIAELAQLCKAKGALLAVDNCFCTPVLQQPLALGADIVIHSATKFIDGQGRCLGGVVAGRAEQMK
EVVGFLRTCGPTLSPFNAWLFLKGLETLRLRMQAHCASAQALAEWLEQQPGIERVYYAGLPSHPQHELARRQQKGFGAVL
SFEVSGGKEGAWRFIDATRLISITANLGDSKTTITHPATTTHGRLSPEDRTNAGIRDSLIRVAVGLEDVADLQADLARGL
AAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-51 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSJM300_07035 YP_006523839.1 O-succinylhomoserine sulfhydrylase BAC0207 Protein 3e-65 41