Gene Information

Name : prrA (MYCMA_1000)
Accession : YP_006520753.1
Strain : Mycobacterium abscessus GO 06
Genome accession: NC_018150
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein prrA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1927715 - 1928389 bp
Length : 675 bp
Strand : +
Note : -

DNA sequence :
ATGGTCGATGACGACCCGGACGTTCGGAACTCGGTAGCCCGCGGGCTACGCCACTCGGGTTTCGACGTCCGGGTCGCGGT
CGATGGCCGCGACGCGCTCACCCAGCTCGCGGCCGATGAGCCCGATGCCCTGGTACTCGACGTGCAGATGCCCGAGCTGG
ACGGGGTTGCGGTGGTCACCGCCCTGCGGGCCCTGGGTAACGACATTCCGATCTGCGTGCTCAGTGCACGCGACACCGTC
AACGACCGAATCGCCGGCCTGGAGGCCGGTGCCGACGACTACTTGACCAAACCCTTTGACCTCGGCGAGCTGGTGGCTCG
CCTGCGTGCGCTGCTGCGCCGTCGCGGCGCCGGTTCGGGCGGCCTCGCCGATTCCGCCATCACCGTCGGACAGATCACCG
TGGACGTGTCGCGCCGCTTGGTCTTCGTCAACGGAGAACGTGTCGAGCTGAGTAAGCGGGAGTTCGATCTGCTGGTGGTG
CTGGCCGAGAACACCGGTGTGGTGCTGAGCCGCACCCGGCTGCTGGAATTGGTGTGGGGGTACGACTTTGACGTCGAGAC
CAATGTGGCCGATGTCTTCGTCAGCTATCTGCGCCGCAAGCTGGAAGCCGGGGGAGCCGCGCGAGTCATCCATACCGTCA
GGGGAGTCGGCTACGTGATGCGGGAAGAGCCGTGA

Protein sequence :
MVDDDPDVRNSVARGLRHSGFDVRVAVDGRDALTQLAADEPDALVLDVQMPELDGVAVVTALRALGNDIPICVLSARDTV
NDRIAGLEAGADDYLTKPFDLGELVARLRALLRRRGAGSGGLADSAITVGQITVDVSRRLVFVNGERVELSKREFDLLVV
LAENTGVVLSRTRLLELVWGYDFDVETNVADVFVSYLRRKLEAGGAARVIHTVRGVGYVMREEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-26 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 9e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
prrA YP_006520753.1 transcriptional regulatory protein prrA HE999704.1.gene1528. Protein 9e-36 43
prrA YP_006520753.1 transcriptional regulatory protein prrA BAC0308 Protein 6e-30 42
prrA YP_006520753.1 transcriptional regulatory protein prrA AE000516.2.gene3505. Protein 4e-25 42
prrA YP_006520753.1 transcriptional regulatory protein prrA NC_013450.8614146.p0 Protein 3e-30 41
prrA YP_006520753.1 transcriptional regulatory protein prrA NC_002951.3238224.p0 Protein 3e-30 41
prrA YP_006520753.1 transcriptional regulatory protein prrA NC_007793.3914065.p0 Protein 3e-30 41
prrA YP_006520753.1 transcriptional regulatory protein prrA NC_002758.1121390.p0 Protein 3e-30 41
prrA YP_006520753.1 transcriptional regulatory protein prrA NC_010079.5776364.p0 Protein 3e-30 41
prrA YP_006520753.1 transcriptional regulatory protein prrA NC_002952.2859858.p0 Protein 3e-30 41
prrA YP_006520753.1 transcriptional regulatory protein prrA NC_007622.3794948.p0 Protein 3e-30 41
prrA YP_006520753.1 transcriptional regulatory protein prrA NC_003923.1003417.p0 Protein 3e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
prrA YP_006520753.1 transcriptional regulatory protein prrA VFG1389 Protein 2e-55 60
prrA YP_006520753.1 transcriptional regulatory protein prrA VFG1390 Protein 3e-43 50
prrA YP_006520753.1 transcriptional regulatory protein prrA VFG1386 Protein 6e-35 46
prrA YP_006520753.1 transcriptional regulatory protein prrA VFG0596 Protein 1e-26 41