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Name : clpC (MYCMA_0275) Accession : YP_006520054.1 Strain : Mycobacterium abscessus GO 06 Genome accession: NC_018150 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 547224 - 549758 bp Length : 2535 bp Strand : + Note : - DNA sequence : ATGTTCGAGAGATTCACTGACCGCGCCAGGCGGGTGGTTGTGCTGGCCCAAGAAGAGGCCCGCATGCTCAACCACAACTA CATCGGCACCGAGCACATCCTGCTGGGTCTGATCCATGAGGGCGAGGGCGTTGCCGCCAAGTCGCTCGAGTCGTTGGGCA TCTCTCTGGAAGGGGTGCGCAGCCAGGTCGAGGAGATCATCGGCCAGGGTCAGCAGGCGCCGTCCGGGCACATTCCGTTC ACTCCGCGTGCCAAGAAGGTGCTGGAGCTGAGCCTGCGCGAGGCGCTGCAGCTCGGCCACAACTACATCGGCACCGAGCA CATCCTGCTCGGCCTGATTCGTGAGGGCGAGGGCGTTGCCGCACAGGTGCTCGTCAAGCTGGGCGCCGAGCTGACTCGGG TGCGTCAACAGGTCATCCAGCTGCTCAGTGGCTACCAGGGCAAGGAGACCGCAGAATCGGGTACCGGTGGCAGGGGCGGA GAAGCCGGCACACCTTCTACGTCGCTGGTGCTCGACCAGTTCGGCCGCAATCTGACCGCGGCCGCCATGGAGGGCAAGCT CGATCCGGTCATCGGCCGTGAGAAGGAAATCGAGCGGGTCATGCAGGTGCTGAGCCGCCGCACCAAGAACAACCCGGTGC TGATCGGCGAGCCCGGTGTCGGCAAGACCGCCGTCGTCGAGGGTCTGGCCCAGGCGATCGTGCACGGCGAGGTGCCCGAG ACACTGAAGAACAAGCAGCTGTACACCCTGGACCTGGGGTCCCTGGTGGCCGGCAGCCGCTACCGCGGTGATTTCGAGGA ACGCCTCAAGAAGGTGCTCAAGGAGATCAACACCCGTGGTGACATCATCCTGTTCATCGACGAGCTGCACACGCTGGTGG GTGCGGGCGCGGCCGAGGGCGCGATCGACGCGGCCTCGATCCTGAAGCCGAAGCTGGCTCGTGGCGAGCTGCAGACCATC GGTGCGACCACTCTCGACGAGTACCGCAAGTACATCGAGAAGGACGCCGCCCTGGAGCGCCGGTTCCAGCCGGTGCAGGT GGGCGAGCCGACGGTCGAGCACACCATCGAGATCCTCAAGGGTCTGCGCGACCGCTACGAGGCACACCACCGGGTGTCCA TCACCGATGGCGCGTTGGTTGCCGCGGCCACCCTGGCCGATCGGTACATCAACGACAGGTTCTTGCCCGACAAGGCGATC GACCTGATCGACGAGGCCGGTGCCCGCATGCGCATCCGCCGCATGACCGCTCCGCCAGACCTGCGCGAATTCGACGAAAA GATCGCCGATGCGCGCCGGGAGAAGGAATCGGCCATCGACGCGCAGGACTTCGAGAAGGCCGCGCGCCTGCGCGACTCGG AGAAGCAGCTGGTGGCGCAGCGTGCCGATCGCGAAAAGCAATGGCGTTCAGGTGACTTAGATGTGGTCGCGGAAGTCGAT GATGAGCAGATCGCCGAGGTGCTGGGCAACTGGACCGGTATCCCCGTGTTCAAGCTGACCGAGGAGGAAACCACTCGGCT GCTGCGCATGGAGGACGAGTTGCACAAGCGGATCATCGGCCAGGAGGACGCCGTCAAGGCCGTCTCCAAGGCGATCCGCC GTACCCGTGCTGGTTTGAAGGACCCGCGGCGCCCCTCGGGCTCCTTCATCTTCGCCGGGCCGTCCGGTGTCGGTAAGACC GAGCTGTCCAAGGCGCTGGCCAACTTCCTGTTTGGCGACGACGACGCGCTCATCCAGATCGACATGGGCGAGTTCCACGA CCGCTTCACCGCCTCAAGGCTTTTCGGTGCTCCCCCGGGATACGTCGGCTACGAGGAGGGCGGCCAGCTCACCGAGAAGG TGCGTCGCAAGCCGTTCAGCGTCGTGCTGTTCGACGAGATCGAGAAGGCTCACCAGGAGATCTACAACACCCTGTTGCAG GTTCTCGAGGACGGTCGTCTCACCGATGGCCAGGGACGCACGGTCGATTTCAAGAACACCGTGCTGATCTTCACCTCGAA CCTGGGCACGTCGGATATCTCGAAGGCCGTTGGCCTCGGATTCTCCGAAGGTGCGGCCGGCTCGAACTACGAGCGGATGA AGCAGAAGGTCCACGACGAGCTCAAGAAGCACTTCCGCCCCGAGTTCCTCAACCGCATCGACGACATCATCGTCTTCGAG CAGCTGACGCAGGAACAGATCATCGAGATGGTCGACCTGATGATCGGGCGGGTGGGCAAGCAGCTCAAGACCAAGGACAT GGCCATGGAGCTCACCGACAAGGCCAAGTCGCTGCTGGCCAAGCGCGGATTCGATCCGGTGTTGGGTGCTCGCCCGCTGC GTCGGACCATTCAGCGCGAGATCGAGGACGCACTCTCGGAGAAGATTCTCTTCAACGAGGTCGGTCCCGGCGAGCTGGTG ACCGTCGACGTCGAGAACTGGGACGGCGAGGGTGCCGGCGAGGACGCGAAGTTCACCTTCGTCGGCCGTCCGAAGCCCGC ACTGGTCGCCGGTGAGGAGCCGGCCGCCGACCTGGCCGCCTCCGCCTCGGAGTAA Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLLSGYQGKETAESGTGGRGG EAGTPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE TLKNKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTI GATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGALVAAATLADRYINDRFLPDKAI DLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAARLRDSEKQLVAQRADREKQWRSGDLDVVAEVD DEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPRRPSGSFIFAGPSGVGKT ELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQ VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKAVGLGFSEGAAGSNYERMKQKVHDELKKHFRPEFLNRIDDIIVFE QLTQEQIIEMVDLMIGRVGKQLKTKDMAMELTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDALSEKILFNEVGPGELV TVDVENWDGEGAGEDAKFTFVGRPKPALVAGEEPAADLAASASE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 83 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_006520054.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 0.0 | 60 |
| clpC | YP_006520054.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 6e-147 | 50 |
