Gene Information

Name : lolD (MYCMA_2575)
Accession : YP_006522309.1
Strain : Mycobacterium abscessus GO 06
Genome accession: NC_018150
Putative virulence/resistance : Resistance
Product : lipoprotein-releasing system ATP-binding protein LolD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4752443 - 4753159 bp
Length : 717 bp
Strand : -
Note : -

DNA sequence : 
ATGAATAGTCCTGAAAAGCCGGAGGTTCCGCCGGAGCCGGTCCTGCAACTGAAAGGTGTTGCGCATCAGTACGGAACCGG
CGCTGCGGCGGTGCACGCGCTGAGGGGCTTGGATCTAACAGTCAATACCGGTGAGGTGGTGCTTGTTGTCGGTCCCTCCG
GTGGCGGCAAGACCACGGCATTACTCGTCATGGGCCTACTGCTGACTCCAGCCTCGGGGCTGGTCAGGATCGGGGGCCGG
GATGTGGGTGAGCTCGCGGAGCGAGAACGCGCACACATCAGGCTGGAGAAACTGGGATTTCTGTTCCAGGAATACAACCT
GTTGAACGCGTTGACGAGTGCGGAGAATGTGGCCCTGCCGTTGCGTTACGCCGGGGTGAGTAAGAACAAAGCCATGTCAC
GTGCGCGGGGCTTGCTGGCCGACCTCGGGCTGGAGCATCGGACCGATCATCGTCCACCGGCGCTCTCGGGCGGTGAGAAG
CAACGTGTTGCCGCCGCACGGGCGCTGGTGGCCCGTCCGGGCCTGGTCCTTGCCGACGAACCGACCGCGAATCTGGATTC
GGCCACCGGCAAGAGGGTTGCCGCGCAGCTCGCGGACGCGGCCCGAAGCCAAGGGGCGGCGGTGGTGATCGTGACCCACG
ATCTACGCCTTACCGATATCGCGGATCGAGTACTGCATCTGGAAGATGGCGTGCTGCTGGAGAAAGAGAACCAATGA

Protein sequence : 
MNSPEKPEVPPEPVLQLKGVAHQYGTGAAAVHALRGLDLTVNTGEVVLVVGPSGGGKTTALLVMGLLLTPASGLVRIGGR
DVGELAERERAHIRLEKLGFLFQEYNLLNALTSAENVALPLRYAGVSKNKAMSRARGLLADLGLEHRTDHRPPALSGGEK
QRVAAARALVARPGLVLADEPTANLDSATGKRVAAQLADAARSQGAAVVIVTHDLRLTDIADRVLHLEDGVLLEKENQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-23 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-25 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-25 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_006522309.1 lipoprotein-releasing system ATP-binding protein LolD NC_008702.1.4606598. Protein 4e-33 46
lolD YP_006522309.1 lipoprotein-releasing system ATP-binding protein LolD NC_012469.1.7686878. Protein 3e-32 42
lolD YP_006522309.1 lipoprotein-releasing system ATP-binding protein LolD CP001581.1.gene798.p Protein 1e-29 41