|
Name : gabD (MYCMA_2455) Accession : YP_006522189.1 Strain : Mycobacterium abscessus GO 06 Genome accession: NC_018150 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase [NADP(+)] GabD Function : - COG functional category : - COG ID : - EC number : 1.2.1.79 Position : 4497711 - 4499171 bp Length : 1461 bp Strand : + Note : - DNA sequence : ATGCATCCCGGCACAGTGTCTACCCCCCTGTCGTCCAGCTCGTCGGTGGTCGACAGCGCGCTCACCCACCAGGACCGTCA CGAAACCACCTTTCCGGTCGTCAATCCCGCGACCGAGGAAGTGCTGGCCGACGTAGCCGATCTGGACGGCGCCGCGGCCG TCGCCGCGCTGGACAATGCCGTTGCCGCTCAAAGATCCTGGGCCGCGACCACACCGCAGCAGCGATCCGATGTGCTGATG CGTGCCTATACCCTGATGATCCAGCGCACTGAGGACCTGGCACTGCTGATGACCCTGGAGATGGGCAAGCCGCTGCCTGA GTCACGCGGCGAAGTCGCTTATGCGGCAGAGTTTTTCCGCTGGTTCGCAGGCGAGGCCGTGCGCCTGGACGGGGGTGTGA TGCTGGCACCCGACGGCCAGTCGCGATTGATCGTCACACACCGCCCGGTGGGCCCCTGCCTGCTCATTACCCCGTGGAAC TTCCCACTGGCCATGGGAACCCGCAAGATCGGCCCCGCACTGGCCGCGGGCTGCACCTGCCTGGTCAAGCCCGCCGAACA GACACCGCTATCGATGCTCGCCCTGCTGGGCATCCTGCGCGAGGCGGGTGTCCCCGACGGCGTCGTCTCGGTCATCACCA CCGCCGATCCCGGCGCGACCATGGCGCCGCTGCTCGCCGACCCCCGGGTACGCAAGCTCTCGTTTACCGGGTCCACCGAG GTTGGGCGCTACTTGCTGGCCCAGTGCGCCCCCACCGTCAAACGCACGTCGATGGAGCTGGGCGGCAACGCGCCATTCAT CGTCTTTGACGACGCCGACCCCGATGAGGCAGCCGCCGGTGCGTTGATCGCAAAGATGCGCAACATCGGCCAGGCGTGCA CGGCCGCCAACAGAATCTACGTGCAGCGCGGTATCGCCGACGCGTTCACCGAGGCGCTGACCGCCAAACTCGCCGCACTG CGCATGGGCCCCGGCGTGGAGTCGGGGGTCGATGTGGGCCCGCTGATCGATCCCGATGCCGTGGCCAAGGCCGATCGACT GGTGACGGACGCCCGAAAGCGCGGTGCCACAGTGCGGCTGGGCGGAGAGGTGCCCGACGGCACCGGCTACTTCTACCCTC CATCGGTGTTGACCGATGTGCCCGACGAGAGCGACATGATGCGCACCGAGATCTTCGCCCCGGTCGCCGCGATAGCGACA TTCGAGACCGAGCAGGAAGTGATCACGCGCGCCAATGACTCCGAATTCGGCCTCGTGGCATACCTTTACACCAATGACAC GCGACGCGGATGGCGCGTGTCCGAGCAGCTGGAGACGGGCATGGTGGGACTGAATCGTCCCGTCGTGTCGACGCCCGCCG CGCCGTTCGGAGGTGTCAAGCAGTCCGGGGTCGGACGCGAAGGCGGCTTCGCGGGAATCGAGGAGTTCATGGAGACCAAG TACATCGGCGCGGCGGTATGA Protein sequence : MHPGTVSTPLSSSSSVVDSALTHQDRHETTFPVVNPATEEVLADVADLDGAAAVAALDNAVAAQRSWAATTPQQRSDVLM RAYTLMIQRTEDLALLMTLEMGKPLPESRGEVAYAAEFFRWFAGEAVRLDGGVMLAPDGQSRLIVTHRPVGPCLLITPWN FPLAMGTRKIGPALAAGCTCLVKPAEQTPLSMLALLGILREAGVPDGVVSVITTADPGATMAPLLADPRVRKLSFTGSTE VGRYLLAQCAPTVKRTSMELGGNAPFIVFDDADPDEAAAGALIAKMRNIGQACTAANRIYVQRGIADAFTEALTAKLAAL RMGPGVESGVDVGPLIDPDAVAKADRLVTDARKRGATVRLGGEVPDGTGYFYPPSVLTDVPDESDMMRTEIFAPVAAIAT FETEQEVITRANDSEFGLVAYLYTNDTRRGWRVSEQLETGMVGLNRPVVSTPAAPFGGVKQSGVGREGGFAGIEEFMETK YIGAAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-87 | 49 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 6e-92 | 46 |
