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Name : lysX (MYCMA_1249) Accession : YP_006521000.1 Strain : Mycobacterium abscessus GO 06 Genome accession: NC_018150 Putative virulence/resistance : Unknown Product : Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 2373836 - 2377069 bp Length : 3234 bp Strand : - Note : - DNA sequence : GTGACCTCACGGTGGCGCTGGGTCCCGGCGTTCTTCGGCTGGTTTGTCGGCATCCAGGCGATCCTGAACTTCCTGTCGAG CATTTCGCCATTCATTCGGATGGTGACGAAGCTGCCTCGCGAGTTCGTCGACGAATATCTGTTCGGTTGGCCCGACGGCA GCCTGTCCTGGGCTTTTGTGCTGTCGCTACTGGCCGCCGCCCTCGCCGTGCGCAAGAGCATCGCCTGGTGGGTGCTCTTG ATCGACCTACTGGGACGGTCAGCACTGAACGTGGGCGGCTTCATAGAGCATCGCGACACCACCGAGCTGGTCGGTCTCGT CGTGCACGGCGCGTTCATCCTGTTGCTGCTGCTCGCGCGTAAGGAGTTCTACGCCAAGGTACGGCGCGGCGCGACGGTCA AGGCGGCGCTGGTGCTGATCGCGGGGATGGCCGCCGGGACAGTCCTGGCATGGGGCCTGCTGGAGCTCTTTCCCCGCACG CTTGTCCCCGGTGATCGTTTCTGGTGGGCACTCAATCGGGTGGCCGGCTTTTCGATCGCCTCACACCGCGATTTCGACGG TCTGCCCCCTCACTTCCTGAACTGGCTCTTCGGGCTATTCGGCGCGCTGGCCCTGATCGCCGCGGCAATCGTGTTGTTCC GCTCGCAACGAGCCGTCAACGCACTGACCGGTGATGACGAATCTCTGATCCGCGGACTCCTGGAGCGTTATGGGCAGGAC GACTCCCTGGGGTATTTCGCGACGAGACGCGACAAGGCGGTCATCTTCGCACCCAATGGCCGAGCGGCTGTGACATATCG GGTGGAAGTCGGCGTCTGCCTGGTCAGTGCCGATCCCATTGGGGACAAATCGGCTTGGGGCCAAGCTATTTCCGCATGGC TGCAGGTGTGCGACGCGTACGGCTGGGCGCCTGCGGTCATGGGCGCCAGCGCCGAAGGTGCGCTGGCGTATCGCGAGCAT GGGCTCAACGCACTGGAACTCGGCGACGAGGCCATCCTGTACCCGCGCTCATTCTCGATTTCGGGTCCGCACATGGCCGC GGTCCGGCAGGCGGTCAACCGCGCCCGACGTTCGGGACTCTCGGTGCGTATCCGCCGCCATCGCGAACTGAGCGCCGAAG ACACGAAACAGATCATCGTCAATGCCGACCTGTGGCGTGATGGCAATACCGAGCGCGGCTTCTCGATGGCGCTGGGGCGG TTGGGGGATTCCACCGACGGCGACTGCCTGTTGGTTGAGGCGATCGATTCCACGGGCGATCCCGTCGCCATGCTGTCTCT CGTACCTTGGGGCACCAACGGGGTGTCCCTCGAGCTCATGCGCCGCTCGCGTCAATCACCCAACGGCACTATCGAATTCA TGGTCACGGAGCTGCTCACACGCGCAGAGGGCATGGGGATCACCCGCGTTTCCCTCAACTTTGTGATGTTCCGCTCGGTC TACGCCGACGGCTCCCGAATCGGAGCGGGCCCGGTGCTACGACTGTGGCGCTCGGTGCTGATGTTCGCCTCACGGTTCTG GCAGTTCGAGCAGTTGTATCGCTCCAATGTGAAGTATCAGCCGGAATGGGTGCCCCGGTTCGCCTGCTACGAGGACGCCC GGCTCATCCCCCGCATCGGCATCGCGTCGGTGATCGCCGAAGGCTTCCTGGTGCTGCCCTTCGGCAACCGCGACAAGCCG AGGCACACCGGCCAGTACAGCGCGGTTCCGCAGGCCATCGTGGCCACGGGCCTGCTGCATCACGATGGCAGCACACCCGA GCTACTGCCCCAAACGGCACCTCAACAGCGCGTACCGGAGCAGGTCAAGGTTCGACTGGGCAAGCTGGCTGCCTTACAGG AGAAGGGAATCGACGCGTACCCGGTGGGATCGCCACCGTCCCATACCGTCGCCGAGGCCCTTGCCGCACCCGACGGTAGC GAAGTGGTGATCAGCGGGCGCTTGTTGCGAATCCGCGACTACGGCGGTGTGTTGTTCGCACAGCTACGGGATTGGTCCGC GGAGGTGCAGCTGCTTATCGACGATCCGCGGCTACACGAAGAGTTCACCGCCGCCGTCGATCTGGGTGACCTGGTCGAGG CCAGCGGGGTCATGGGTCAATCGAACAACGGCACCCGATCAGTCTTGGTGAAGTCGTGGCGGATCATCGGCAAATGCCTG CACCCGCTCCCCGACAAGCGTAAGGGCCTTACCGACCCCGAAGCCAGGGTGCGTGCACGATACCTCGACCTGGCGATCAA CCCCGAGGCTCGCGAGCAGATCGCGGCCCGTAGCGCGATCATCACATCGCTGCGCAATACCCTTTTGGCTCAAGGCTTCC TAGAGGTGGAAACACCAATCCTGCAGCAGGTGCACGGCGGAGCCAACGCGCGTCCCTTCCTGACGCACATCAACGCGTAC AACCTGGATCTGTATCTGCGTATCGCCCCGGAGCTGTACCTCAAGCGGCTCTGCGTCGGTGGCGTGGAGAAGGTCTTCGA ATTGGGCCGGGCCTTCCGCAACGAGGGCGTGGACTTCAGCCATAATCCCGAATTCACCCTGCTCGAGGCCTATCAGGCAC ACGCCGACTATGTGACTTGGGCCAAGACCACACAGCGGCTCATCCAGAACGCCGCGAAAGCCGCCCACGGGGCCGAAGTA GTGATGCGGCCCGGTGTCGACGGGAGGCTGGCACCGGTGGACATCGGTGGCGAATGGCCGATCGTCCCGGTGCATGAGGC GGTCTCTCACGCGCTGGGTGAAGAGGTCAACGCTGCGACGGAAGTGCCGGCACTGCGAAGGTTCTGCCAGTCCGCGGAGG TGCAGTTCAATCCGCGCTGGGATGCCGGCCACCTGGTCCTGGAACTCTACGAACGGCTGGTGGAGAAACACACGACCTCA CCCACGTTCTATAGCGATTTCCCGGTCTCGGTATCGCCGCTTACCCGCCCGCACCGCAGCATCACCGGGCTCGCCGAGCG CTGGGACCTGGTCGCGTGGGGTGTCGAACTCGGCACCGCCTATACCGAGCTGACCGACCCGGTGGAACAGCGCCGACGCC TGTATGAGCAATCACTGCTGGCGGCCGGCGGAGACCCCGAAGCGATGGAACTCGACGAGGATTTCCTGCGCGCGATGGAG TACGCAATGGCGCCGACCGGCGGGATGGGCATGGGAGTGGACCGGGTGGTCATGCTGATCACCGGGCGCAGCATCCGCGA AACACTGCCCTTCCCGCTGGCCAAGCCCCGCTAG Protein sequence : MTSRWRWVPAFFGWFVGIQAILNFLSSISPFIRMVTKLPREFVDEYLFGWPDGSLSWAFVLSLLAAALAVRKSIAWWVLL IDLLGRSALNVGGFIEHRDTTELVGLVVHGAFILLLLLARKEFYAKVRRGATVKAALVLIAGMAAGTVLAWGLLELFPRT LVPGDRFWWALNRVAGFSIASHRDFDGLPPHFLNWLFGLFGALALIAAAIVLFRSQRAVNALTGDDESLIRGLLERYGQD DSLGYFATRRDKAVIFAPNGRAAVTYRVEVGVCLVSADPIGDKSAWGQAISAWLQVCDAYGWAPAVMGASAEGALAYREH GLNALELGDEAILYPRSFSISGPHMAAVRQAVNRARRSGLSVRIRRHRELSAEDTKQIIVNADLWRDGNTERGFSMALGR LGDSTDGDCLLVEAIDSTGDPVAMLSLVPWGTNGVSLELMRRSRQSPNGTIEFMVTELLTRAEGMGITRVSLNFVMFRSV YADGSRIGAGPVLRLWRSVLMFASRFWQFEQLYRSNVKYQPEWVPRFACYEDARLIPRIGIASVIAEGFLVLPFGNRDKP RHTGQYSAVPQAIVATGLLHHDGSTPELLPQTAPQQRVPEQVKVRLGKLAALQEKGIDAYPVGSPPSHTVAEALAAPDGS EVVISGRLLRIRDYGGVLFAQLRDWSAEVQLLIDDPRLHEEFTAAVDLGDLVEASGVMGQSNNGTRSVLVKSWRIIGKCL HPLPDKRKGLTDPEARVRARYLDLAINPEAREQIAARSAIITSLRNTLLAQGFLEVETPILQQVHGGANARPFLTHINAY NLDLYLRIAPELYLKRLCVGGVEKVFELGRAFRNEGVDFSHNPEFTLLEAYQAHADYVTWAKTTQRLIQNAAKAAHGAEV VMRPGVDGRLAPVDIGGEWPIVPVHEAVSHALGEEVNAATEVPALRRFCQSAEVQFNPRWDAGHLVLELYERLVEKHTTS PTFYSDFPVSVSPLTRPHRSITGLAERWDLVAWGVELGTAYTELTDPVEQRRRLYEQSLLAAGGDPEAMELDEDFLRAME YAMAPTGGMGMGVDRVVMLITGRSIRETLPFPLAKPR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 1e-145 | 41 |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 1e-145 | 41 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 1e-145 | 41 |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 1e-145 | 41 |
