Gene Information

Name : ZZ6_0639 (ZZ6_0639)
Accession : YP_006518058.1
Strain : Zymomonas mobilis ATCC 29191
Genome accession: NC_018145
Putative virulence/resistance : Virulence
Product : FliI/YscN family ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 743188 - 744519 bp
Length : 1332 bp
Strand : -
Note : TIGRFAM: ATPase, type III secretion system, FliI/YscN; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; KEGG: zmn:Za10_0626 ATPase, FliI/YscN family; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGAGTGAAAGCCTAGCCGCCTATGCTGGACGTATTCTTGGCCATGTCTCGATTGATGAAGGAACACCTCGGTGGATTGG
CAAACTTGTTGCTTATGATGGCCTGATGCTGGAAGCAACAGGCTTCCCCATGCCTATTGGGCATGGTGCTCTTATTATGG
ATGCTAATGGTCAATCATCACGGGCTGAAGTGGTTGGGTTCCGTGGTAATACAACGTTGCTTATGGCGCTAGATGCTGAT
GCACCTCATAATCCTGGAGCCAGAGTTGAACCGGATAGGCAGTTAAGTATTGTCCATGTTGGCGATGGTTTATTGGGACG
TGTTATAGGTGCGTTGGGCGAGCCTCTTGATAACTTAGGCCCTATTATCACTGACGAATATTGGCCATTGGTCGGAAAAA
TGGGGAATCCTCTCAATCGAGGGCGTGTAACGCAGCCTTTTGATATGGGGGTTCGGGCGATCAATGCCTTGCTAACGGCT
GGTGTCGGGCAAAGAATTGCTATCATGGCGGGGTCAGGGGTTGGTAAATCTGTTCTGATGGGGCAGATGATTGCTGGCGC
GAAGGCTGATGTTATTGTAACGGGGTTGATCGGAGAGCGATCACGTGAAGTAACTGATTTTGTTGAAACCAAAATTAGTG
ATGATGTTCGGCCAAAAAGTGTTGTCGTGGCAGTTCCTGCCGACCATCCTCCAGTTTTACGCTTAAGGGCGGCAATGCGG
GCAACTGCGATTGCCGAATATTTTCGAGCGAAGGGTAAAAATGTTCTTTTACTGATCGACAGCTTGACCCGTATTGCGCA
TGCACAACGGGAAGTAGGTCTATCACTTGGTGAACCTCCTACAATCAAAGGCTATCCACCCTCGGCTTTAGGACTTATTC
CTCGTTTGGTCGAAAGAGCGGGTATCGATATTCATTCAAAAGGCGCGATTACCGCTATTTATACGGTCTTGGCTGACGGT
GATGATCCTGACGATCCAATCGTTGATACTGCACGAGCCATTGTTGACGGGCATATTATCTTATCTCGTTCACTGGCAGA
ACAAGGCGTTTTTCCTGCTATTGATCTCGGTAAGTCGCTTTCTCGTGTCATGAGCGATATTATTTCGCCTAGACATAGAC
AGGCAGCAGCCCACCTGCGCCGTTTATGGTCTGTTTATGAAGAAAATCGTGATCTTATCTTAATGGGTGCCTATCGTAGC
GGCACAGATGCTTCTATTGATGAAGCCATCAATCGCCACAATGATGTTTTAAACTTTATTCGTCAAGGGCAAAATGAGAG
AATTGATCTCGCCTCGTCTATTGCGACTTTGATGGAAAGGTTTGCCGTATGA

Protein sequence :
MSESLAAYAGRILGHVSIDEGTPRWIGKLVAYDGLMLEATGFPMPIGHGALIMDANGQSSRAEVVGFRGNTTLLMALDAD
APHNPGARVEPDRQLSIVHVGDGLLGRVIGALGEPLDNLGPIITDEYWPLVGKMGNPLNRGRVTQPFDMGVRAINALLTA
GVGQRIAIMAGSGVGKSVLMGQMIAGAKADVIVTGLIGERSREVTDFVETKISDDVRPKSVVVAVPADHPPVLRLRAAMR
ATAIAEYFRAKGKNVLLLIDSLTRIAHAQREVGLSLGEPPTIKGYPPSALGLIPRLVERAGIDIHSKGAITAIYTVLADG
DDPDDPIVDTARAIVDGHIILSRSLAEQGVFPAIDLGKSLSRVMSDIISPRHRQAAAHLRRLWSVYEENRDLILMGAYRS
GTDASIDEAINRHNDVLNFIRQGQNERIDLASSIATLMERFAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-64 47
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 1e-64 46
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 1e-64 46
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-64 46
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 3e-64 46
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-63 46
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 4e-63 46
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-64 46
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-62 45
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-62 45
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-58 45
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-58 45
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-58 45
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 3e-58 45
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-58 45
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-58 45
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-58 45
escN YP_003223475.1 translocator EscN Virulence LEE Protein 4e-60 44
unnamed AAL06369.1 EscN Virulence LEE Protein 2e-58 44
escN CAI43874.1 EscN protein Virulence LEE Protein 3e-60 44
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 2e-52 43
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 4e-54 42
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 4e-54 42
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 1e-60 42
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 1e-44 42
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 1e-44 42
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 1e-44 42
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 1e-44 42
escN CAC81862.1 EscN protein Virulence LEE II Protein 3e-60 41
escN AAC31513.1 L0034 Virulence LEE Protein 3e-60 41
escN YP_003236088.1 translocator EscN Virulence LEE Protein 9e-60 41
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 3e-60 41
escN AAK26715.1 EscN Virulence LEE Protein 2e-60 41
escN NP_290268.1 hypothetical protein Virulence LEE Protein 3e-60 41
escN AAL57542.1 EscN Virulence LEE Protein 2e-60 41
ECs4568 NP_312595.1 EscN Virulence LEE Protein 3e-60 41
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 3e-60 41
escN AAC38383.1 EscN Virulence LEE Protein 2e-60 41
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 2e-54 41
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 1e-54 41
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 5e-55 41
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 4e-48 41
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 4e-48 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ZZ6_0639 YP_006518058.1 FliI/YscN family ATPase VFG1254 Protein 4e-77 49
ZZ6_0639 YP_006518058.1 FliI/YscN family ATPase VFG2499 Protein 3e-70 49
ZZ6_0639 YP_006518058.1 FliI/YscN family ATPase VFG2331 Protein 6e-71 47
ZZ6_0639 YP_006518058.1 FliI/YscN family ATPase VFG0390 Protein 8e-61 45
ZZ6_0639 YP_006518058.1 FliI/YscN family ATPase VFG0515 Protein 2e-58 45
ZZ6_0639 YP_006518058.1 FliI/YscN family ATPase VFG0048 Protein 2e-66 44
ZZ6_0639 YP_006518058.1 FliI/YscN family ATPase VFG0192 Protein 2e-61 44
ZZ6_0639 YP_006518058.1 FliI/YscN family ATPase VFG1008 Protein 1e-53 43
ZZ6_0639 YP_006518058.1 FliI/YscN family ATPase VFG0555 Protein 5e-45 42
ZZ6_0639 YP_006518058.1 FliI/YscN family ATPase VFG0812 Protein 1e-60 41
ZZ6_0639 YP_006518058.1 FliI/YscN family ATPase VFG0730 Protein 1e-60 41