Gene Information

Name : fepD_1 (HMPREF9154_0778)
Accession : YP_006511085.1
Strain : Propionibacterium propionicum F0230a
Genome accession: NC_018142
Putative virulence/resistance : Virulence
Product : ferric enterobactin transport system permease FepD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 828284 - 829351 bp
Length : 1068 bp
Strand : -
Note : -

DNA sequence :
ATGCGATCTTCCACTGATCAGGCCGACACCCCCGCTCGGCCCGGCCGTCCCCGATTCACCAGGAAACGCAGCGGTCCCCT
GCGTTTCCTGGCCCCACTGCTGGCGGTTCTGGTCCTCCTCGTGCTGATCACCGAGAGCCTGGCTCTGGGTTCCCGGACCT
TGAGCCCGGAGGAGGTCTGGCAGGGATTCCTGGCGTACGACAACTCGGTTGCCAGCAAGGTGGTGTGGGGGCTGCGCATC
CACCGCACCATCCTCGCGATCGTGGTGGGCGCCTCTCTCGCCGTGGCCGGGGTTGTCATGCAGGCCCTCACCCGCAATCC
TTTGGCGGAACCCGGCATCCTCGGGGTCAACGCGGGCGCCTCCCTCGCGGTGGTCGCGGCCATCGGAGGGCTCGGGTTGA
CCTCCGTGAACCAGTACCTGCCGTTCGCGTTCGCCGGTGCGGCGGCAGCCGCGGTTCTCGTCCACGTGATGGCGCGGCGC
TCGGCCGATGCCGGGCCCGCCCGCCTGGTGCTGGCCGGGGTCGCGCTGGGCGCCAGTCTGTCGTCGATAACCGGCACCAT
GACCATGTACAACAGCAAGGCCTTCGACTCGTACCGATTCTGGGTGGTGGGTTCGCTCGAGAACCGGAAACTGGAGGTCC
TGCTCTGGGTTGCCCCCTTCCTGGCGGTGGGTCTGGTCCTGGCCCTGGCGTCGGCGCACAGCCTCAACGCGCTGGCCCTG
GGCGACGAGCAGGCCACGGCACTCGGGGTGAACCTCGCGGTGGTGCGGGGCGGGGCGTTCGTCGCGATCACTTTGTTGTG
CGGGGCGGCAACGGCCGCCGCCGGTCCGATCTCCTTCATAGGCCTGGTCATCCCCCACGTGGTTCGTCTGCTGGTGGGGG
CCGATCAGCGACGCCTGCTGGCGTGGTCGGTCGCGGCGGGGGCAGGGCTCCTGCTGGCGGCCGACGTGGTGGGACGGCTC
CTGGTGCGCCCCACCGAGCTGGAGGCCGGGATCGTGACCGCCTTCATCGGCGCACCCGTGCTGCTGGTCCTGGCTTTGAC
AAACCGGACGGTCAGGAGGAGCGCATGA

Protein sequence :
MRSSTDQADTPARPGRPRFTRKRSGPLRFLAPLLAVLVLLVLITESLALGSRTLSPEEVWQGFLAYDNSVASKVVWGLRI
HRTILAIVVGASLAVAGVVMQALTRNPLAEPGILGVNAGASLAVVAAIGGLGLTSVNQYLPFAFAGAAAAAVLVHVMARR
SADAGPARLVLAGVALGASLSSITGTMTMYNSKAFDSYRFWVVGSLENRKLEVLLWVAPFLAVGLVLALASAHSLNALAL
GDEQATALGVNLAVVRGGAFVAITLLCGAATAAAGPISFIGLVIPHVVRLLVGADQRRLLAWSVAAGAGLLLAADVVGRL
LVRPTELEAGIVTAFIGAPVLLVLALTNRTVRRSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 2e-10 46
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 2e-10 46
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 2e-10 46
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 2e-10 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD_1 YP_006511085.1 ferric enterobactin transport system permease FepD VFG0926 Protein 4e-17 44