Gene Information

Name : regX_2 (HMPREF9154_0704)
Accession : YP_006511017.1
Strain : Propionibacterium propionicum F0230a
Genome accession: NC_018142
Putative virulence/resistance : Virulence
Product : sensory transduction protein RegX3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 749985 - 750701 bp
Length : 717 bp
Strand : +
Note : -

DNA sequence : 
ATGAACAGCGCTTCTGTTGCGGTTGTACCGAGTGTCCTGGTCGTCGACGACGAGCCGGTGCTGTCGGGCACGGTGAAGAA
CTACCTCGAGCGGGCCGGCATGTCGGCCCAGACCTGCGGGGACGGGCTGGCCGCGCTTGACCTTGTCCGGGCCACGGCCC
CCGACGTGGTGGTGCTGGACCTGGGCCTGCCGGGCATGGACGGGGTGGAGGTGTGCCGCCAGCTGCGCACCTTCAGCGAC
TGCTACGTGTTGATGCTCACGGCCCGCGCCGACGAGGTCGACAAGCTGATCGGGTTGTCGGTCGGCGCGGACGACTACAT
GACCAAACCGTTCAGCCCGCGTGAGCTGGTGGCTCGCATCCAGGTGCTGCTGAGACGCCCCCGCGCCGGAAGTACGGGCG
CCACGGCCGCGGTGGTGCACCGCATCGGCGCCCTCACCCTGGACCCGTCGTCGCGTCGGGTGGAGCTCGACGCGTCACCG
GTGGAGCTGACCCGTACCGAGTTCGACCTGTTGCAGGCCCTGGCGGAACACCCCGGCTGGGTGCTGAACCGCCGCCAGCT
CACCGACGCCGTGTGGGGCGAGGACTGGGTCGGCGACGACCACCTGGTCGACGTGCACATCGCGCACCTGCGCAAGAAGC
TCGGTGACGACCCCTCCCAGCCCCGGTTCGTGCAGACGGTGCGCGGCGTCGGCTACCGGATGGGCCAAGGGCAGTGA

Protein sequence : 
MNSASVAVVPSVLVVDDEPVLSGTVKNYLERAGMSAQTCGDGLAALDLVRATAPDVVVLDLGLPGMDGVEVCRQLRTFSD
CYVLMLTARADEVDKLIGLSVGADDYMTKPFSPRELVARIQVLLRRPRAGSTGATAAVVHRIGALTLDPSSRRVELDASP
VELTRTEFDLLQALAEHPGWVLNRRQLTDAVWGEDWVGDDHLVDVHIAHLRKKLGDDPSQPRFVQTVRGVGYRMGQGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 5e-31 44
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-30 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
regX_2 YP_006511017.1 sensory transduction protein RegX3 HE999704.1.gene2815. Protein 2e-43 47
regX_2 YP_006511017.1 sensory transduction protein RegX3 AE000516.2.gene3505. Protein 1e-32 44
regX_2 YP_006511017.1 sensory transduction protein RegX3 NC_002952.2859905.p0 Protein 6e-40 43
regX_2 YP_006511017.1 sensory transduction protein RegX3 NC_009782.5559369.p0 Protein 5e-40 43
regX_2 YP_006511017.1 sensory transduction protein RegX3 NC_002951.3237708.p0 Protein 5e-40 43
regX_2 YP_006511017.1 sensory transduction protein RegX3 NC_007622.3794472.p0 Protein 6e-40 43
regX_2 YP_006511017.1 sensory transduction protein RegX3 NC_003923.1003749.p0 Protein 4e-40 43
regX_2 YP_006511017.1 sensory transduction protein RegX3 NC_002758.1121668.p0 Protein 5e-40 43
regX_2 YP_006511017.1 sensory transduction protein RegX3 NC_009641.5332272.p0 Protein 5e-40 43
regX_2 YP_006511017.1 sensory transduction protein RegX3 NC_013450.8614421.p0 Protein 5e-40 43
regX_2 YP_006511017.1 sensory transduction protein RegX3 NC_007793.3914279.p0 Protein 5e-40 43
regX_2 YP_006511017.1 sensory transduction protein RegX3 NC_002745.1124361.p0 Protein 5e-40 43
regX_2 YP_006511017.1 sensory transduction protein RegX3 NC_012469.1.7685629. Protein 3e-36 42
regX_2 YP_006511017.1 sensory transduction protein RegX3 CP000647.1.gene4257. Protein 2e-27 41
regX_2 YP_006511017.1 sensory transduction protein RegX3 NC_002695.1.915041.p Protein 1e-26 41
regX_2 YP_006511017.1 sensory transduction protein RegX3 BAC0533 Protein 2e-27 41
regX_2 YP_006511017.1 sensory transduction protein RegX3 CP000034.1.gene3834. Protein 1e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
regX_2 YP_006511017.1 sensory transduction protein RegX3 VFG1563 Protein 3e-31 44
regX_2 YP_006511017.1 sensory transduction protein RegX3 VFG1702 Protein 7e-31 44
regX_2 YP_006511017.1 sensory transduction protein RegX3 VFG1389 Protein 1e-34 42
regX_2 YP_006511017.1 sensory transduction protein RegX3 VFG1390 Protein 1e-37 41
regX_2 YP_006511017.1 sensory transduction protein RegX3 VFG1386 Protein 1e-27 41