Gene Information

Name : HMPREF9154_0571 (HMPREF9154_0571)
Accession : YP_006510894.1
Strain : Propionibacterium propionicum F0230a
Genome accession: NC_018142
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 599636 - 600385 bp
Length : 750 bp
Strand : +
Note : -

DNA sequence : 
GTGAGCATCGCTCCACCCGCAGTGGCCCCCGCCTGTGGTGCCCAGAATTTGACGAAGGTGTTCGGGGAGGGTGGGTCCCG
GCCCGTAGTCGCCGTCAACAACGTGACCCTCGCCATCGAGGCCGGATCGTTCACGGCCATCATGGGACCGTCCGGCTCCG
GAAAATCGACTTTGATGCACTGCATGGCCGGACTGGACCGTGCCACCAGCGGATCGGCCTGGGTGGGCGATCAGGATCTG
TCCCGGCTGCCCGAGCGGCAGGTCACCAAAATCCGGCGGGACAAGATCGGCTTCGTGTTCCAGTCCTTCAACTTGCTTCC
CACCCTCACGGCGGAGCAGAACATCCTGCTGCCGCTGGAACTGGCGGGCCGCAAACCGAATCGCGAGGTGTTCAGGGAGA
TCGTCGACTCCCTGGGGCTCGCCGAACGCCTCACCCACCGCCCGAGCCAGCTCTCCGGGGGTCAGCAGCAAAGGGTCGCG
ATCGCGCGGGCACTGGTCACGCGCCCGCAGGTGATATTCGCCGACGAACCGACGGGTGCCCTCGATTCCCGCACGGGCAC
CGCCCTCCTGCAGTACCTGCAGCGATGCTCCCGTGAACAGGGGCAGACCATCATCATGGTCACCCACGACCCGAAGGCCG
CGGGATATGCTGACCGGGCCTTGGTGCTCTCCGATGGGAGCATCGTCGACGACGTGGCCCGGCCCTCTGCCGAGATCATG
CTCGCCAGCCTCGGTCGTCTGGGGGCGTGA

Protein sequence : 
MSIAPPAVAPACGAQNLTKVFGEGGSRPVVAVNNVTLAIEAGSFTAIMGPSGSGKSTLMHCMAGLDRATSGSAWVGDQDL
SRLPERQVTKIRRDKIGFVFQSFNLLPTLTAEQNILLPLELAGRKPNREVFREIVDSLGLAERLTHRPSQLSGGQQQRVA
IARALVTRPQVIFADEPTGALDSRTGTALLQYLQRCSREQGQTIIMVTHDPKAAGYADRALVLSDGSIVDDVARPSAEIM
LASLGRLGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-40 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-42 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-42 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-42 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF9154_0571 YP_006510894.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-45 49
HMPREF9154_0571 YP_006510894.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-36 48
HMPREF9154_0571 YP_006510894.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 5e-45 47
HMPREF9154_0571 YP_006510894.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-41 44
HMPREF9154_0571 YP_006510894.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-35 41