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Name : clpC (HMPREF9154_0429) Accession : YP_006510761.1 Strain : Propionibacterium propionicum F0230a Genome accession: NC_018142 Putative virulence/resistance : Virulence Product : negative regulator of genetic competence ClpC/MecB Function : - COG functional category : - COG ID : - EC number : - Position : 450146 - 452641 bp Length : 2496 bp Strand : + Note : - DNA sequence : ATGTTCGAACGCTTCACTGATCGCGCCCGCCGTGTCATCGTGCTGGCGCAGGATGAGGCCAAGCTGTTAAACCACAACTA CATCGGTACGGAACACCTGCTTCTCGGTCTGATTCACGAGGGCGAGGGCGTGGCCGCCAAGGCGCTGGAACAAATGGGAA TCTCCCTGCAGGCGGCCCGTGAGCAGGTGGTCGAGATCATGGGCCAGGGGCAGCAGGTGCCGTCCGGGCACATCCCCTTC TCGCCGCGCGCCAAGCGCGTGCTGGAACTCTCGCTGCGTGAGGCCCTGCAGATGAACCACAACTACATCGGCACCGAGCA CATCCTGCTCGGGCTGGTGCGGGAGGGCGAGGGAGTGGCCGCCCAGGTGCTCCTGAAGCTCGGGGCCGATCTCGGCCGGG TGCGTTCCACCGTCATCCAGTTGCTGGCCGGGTATCAGGGCAAGGAGGCGTCCATGGCGGGCGCCCCTGAGGCCGGGCCG GAGAAGTCCAGTTCGCAGGTGCTCGACCAGTTCGGCCGCAACCTCACCCAGGCGGCGCGCGAGAACCGGCTCGACCCGGT GATCGGCCGTGTCAGCGAGATCGAGCGCGTCATGACGGTGCTCAGCCGCCGCACCAAGAACAACCCGGTGCTGATCGGCG AACCGGGCGTCGGCAAGACCGCCGTCGTCGAGGGCCTCAGCCAGGCCATCGTCCGCGGCGACGTGCCCGAGACCCTGCGC GACAAGCAGATCTACACCCTGGACCTGGGCGCTCTGGTCGCCGGTTCCCGCTACCGCGGCGATTTCGAGGAACGCCTGAA GAAGGTGCTCAAGGAAATCAAGACCCGCGGCGACATCATGCTGTTCATCGACGAGATCCACACTCTCGTCGGTGCCGGTG CCGCTGAGGGGGCCATCGACGCCGCCAGCATCCTCAAACCCATGCTGGCCCGCGGCGAGCTTCAGACCATCGGCGCCACC ACCCTCGACGAGTACCGCAAACACATCGAGAAGGACGCCGCCCTGGAGCGCCGGTTCCAGCCGATCCAGGTGGCCGAGCC GTCCGTCGCGCTGACCATCGACATCCTGAAGGGCCTGCGGGACCGCTACGAGGCCCACCACCGCATCACCATCACCGACG AGGCCCTCACGGCCGCGGCGACGATGGCGGACCGCTACATCCAGGACCGGTTCCTGCCGGACAAGGCCATCGACCTGATC GACGAGGCCGGTGCGCGGCTGCGCATCCAGCGGATGACCGCCCCGCCGGACCTGCGCGAGTTCGACGAGCAGATCGCGAA ACTGAAGATGGAGAAGGACGCCGCCATCGACGCGCAGGACTTCGAGACCGCGGCCCGGCTGCGTGACGACGTCACCCGCA TCCAGGCGCAGCGCGCGGAGAAGGAGGAGGCCTGGAAGCAGGGCGACTCCGACATTCCCGCAGTGGTGGGCGAGGAGGAG ATCGCGGTCGTGCTGTCCAGCAGCACCGGTATCCCGGTGTTCAAGCTGACGGAGGAGGAGTCGGCGCGCCTGCTGCGCAT GGAGCAGGAGCTGGGGAAGCGCTACATCGGGCAGGAGGACGCCGTCAAGGCCCTCGCCCGTTCGATCCGCCGCACCCGCG CCGGCCTGAAGGACCCGAAGCGTCCCTCCGGTTCCTTCATCTTCGCCGGACCCTCGGGCGTCGGGAAGACGGAGCTCACC AAGGCGCTCACCGAGTTCCTGTTCGGCGACGAGGACGCGCTCATCACCCTCGACATGAGCGAGTACTCCGAGAAGCACAC CGCGTCCAGGATGTTCGGGTCCCCGCCCGGCTACGTCGGCTACGAGGAGGGCGGCCAGCTCACCGAGAAGGTGCGTCGCA AGCCGTTCTCGGTGGTGCTGTTCGACGAGATCGAGAAGGCCCACCCCGACATCTTCAACTCGCTGCTGCAGATCCTCGAC GAGGGGCGTCTCACCGACGCCCAGGGTCGCGTGGTGGACTTCAAGAACACCGTCATCGTGATGACCACCAACCTCGGGTC CCGCGACATCAGCAAGGGAGTCAACCTCGGCTTCTCGCGGGCCGGGGATGAGGCCTCCAGCTACGAGAAGATGAAGGCGA AGGTCTCCGACGAGCTGAAGCAGCACTTCCGTCCCGAGTTCCTGAACCGCGTCGACGAGATCGTCGTGTTCCACCAGCTC ACGCAGTCCGACATCGAACGGATCGTGGACCTGATGGTGGCGCAGATCGAATCCCGCCTGGCGGACCGGGACATGGGCAT CGAACTGACCCCGGCCGCGAAGACCCTCGTCGCCAAACGCGGCTTCGACCCGGTGCTCGGGGCGCGTCCCCTGCGCCGCG CCCTGCAGCGCGACATCGAGGACGTGCTCGCCGAGAAGATCCTGTTCGGGGAGCTGGTCGCCGGGCAGATCGTCCAGGTG GACGTCGCTGAGGAGGGTGCGGAACTGCCGTTCAAGTTCACGGGGATCTCCAAGACCCCGCCGGCTCTCCCCGCGGAGGC CGGTCCCGTCGAATGA Protein sequence : MFERFTDRARRVIVLAQDEAKLLNHNYIGTEHLLLGLIHEGEGVAAKALEQMGISLQAAREQVVEIMGQGQQVPSGHIPF SPRAKRVLELSLREALQMNHNYIGTEHILLGLVREGEGVAAQVLLKLGADLGRVRSTVIQLLAGYQGKEASMAGAPEAGP EKSSSQVLDQFGRNLTQAARENRLDPVIGRVSEIERVMTVLSRRTKNNPVLIGEPGVGKTAVVEGLSQAIVRGDVPETLR DKQIYTLDLGALVAGSRYRGDFEERLKKVLKEIKTRGDIMLFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT TLDEYRKHIEKDAALERRFQPIQVAEPSVALTIDILKGLRDRYEAHHRITITDEALTAAATMADRYIQDRFLPDKAIDLI DEAGARLRIQRMTAPPDLREFDEQIAKLKMEKDAAIDAQDFETAARLRDDVTRIQAQRAEKEEAWKQGDSDIPAVVGEEE IAVVLSSSTGIPVFKLTEEESARLLRMEQELGKRYIGQEDAVKALARSIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELT KALTEFLFGDEDALITLDMSEYSEKHTASRMFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHPDIFNSLLQILD EGRLTDAQGRVVDFKNTVIVMTTNLGSRDISKGVNLGFSRAGDEASSYEKMKAKVSDELKQHFRPEFLNRVDEIVVFHQL TQSDIERIVDLMVAQIESRLADRDMGIELTPAAKTLVAKRGFDPVLGARPLRRALQRDIEDVLAEKILFGELVAGQIVQV DVAEEGAELPFKFTGISKTPPALPAEAGPVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 72 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_006510761.1 | negative regulator of genetic competence ClpC/MecB | VFG0079 | Protein | 0.0 | 58 |
| clpC | YP_006510761.1 | negative regulator of genetic competence ClpC/MecB | VFG0080 | Protein | 3e-154 | 51 |
