Gene Information

Name : HMPREF9154_0365 (HMPREF9154_0365)
Accession : YP_006510704.1
Strain : Propionibacterium propionicum F0230a
Genome accession: NC_018142
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 382159 - 382974 bp
Length : 816 bp
Strand : -
Note : -

DNA sequence : 
ATGCCCTCTCAGGAACAGCTCCACCCATTCGGTGACCCGACCCGCCAGGCCCGGTCCGACATCGTCGTCGAGGCCCGGGG
CCTGTGCAGGACGTACGGTTCCGGGCAGGCGCAGGTCGTCGCCCTCGACAACGTCAATCTCTCGGTCCGGCGGGGTGAGT
TCGTCGCGATCATGGGCCCCTCCGGGTCGGGGAAATCGACGCTCCTGCACTGCCTGGCGGGCCTGGACATCCCCAACGGT
GGACAGAGCCGCATAGCGGGCCGCGACATCACCGGCATGAACGACGACGACCTCACACGGATGCGCCGCGACATGCTCGG
GTTCATCTTCCAGTCGTTCAACCTGCTGCCGAGCCTCAGCGCCGAGGAGAACATCCTCCTGCCGCTTCGCCTGGCGCGCC
GTTCCCCCGACAAGGGCTGGTACGACGCCATCATCGCGGCGCTGGGCATCAAGAACCGCTTGACGCACCGCCCGTCGGAG
CTGTCCGGCGGCCAGCAGCAACGCGTCGCCGTCGCCAGGGCCCTCGCGGGACGTCCCGAAGTGGTCTTCGCCGACGAGCC
GACGGGCGCCCTGGACTCGGAGTCCTCGGATTCGCTGCTGGAGGTCCTGGCCCGGATGTGCGACACGCTGGGGCAGACCG
TGGTCATGGTCACCCACGACGAGAACGCCGCTGCTGCCACCAACCGTGTCGTGCGGCTGCGTGACGGCCGCATCATCGAC
GACAGGTACATCCGTCGCGGCAGCGCCTTCCAGGCCCCGCCGCCCGGAGACCGTCCCGCGGCCGGGCAGCCGCGTCGCCA
GGGGGAGGTTCGCTGA

Protein sequence : 
MPSQEQLHPFGDPTRQARSDIVVEARGLCRTYGSGQAQVVALDNVNLSVRRGEFVAIMGPSGSGKSTLLHCLAGLDIPNG
GQSRIAGRDITGMNDDDLTRMRRDMLGFIFQSFNLLPSLSAEENILLPLRLARRSPDKGWYDAIIAALGIKNRLTHRPSE
LSGGQQQRVAVARALAGRPEVVFADEPTGALDSESSDSLLEVLARMCDTLGQTVVMVTHDENAAAATNRVVRLRDGRIID
DRYIRRGSAFQAPPPGDRPAAGQPRRQGEVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-23 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-22 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-22 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-22 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF9154_0365 YP_006510704.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-29 47
HMPREF9154_0365 YP_006510704.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-23 47
HMPREF9154_0365 YP_006510704.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-28 43
HMPREF9154_0365 YP_006510704.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-23 42