Gene Information

Name : HMPREF9154_2921 (HMPREF9154_2921)
Accession : YP_006513057.1
Strain : Propionibacterium propionicum F0230a
Genome accession: NC_018142
Putative virulence/resistance : Virulence
Product : putative iron(III) dicitrate ABC transporter, ATP-binding protein FecE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3168374 - 3169204 bp
Length : 831 bp
Strand : -
Note : -

DNA sequence : 
GTGATGACGGCGCGGATCAGCGCCCGCGGGCTGCGGCTCAGCCTGGGTGGCAGGCGCATCCTGGACGGCATCGACCTCGA
CTTCGCGCCGGGCCGGGTGCACGGCATCCTCGGGCCCAACGGCTGCGGCAAGACCACCCTCATCCGGGCCCTCAGCGGCG
CGTTGCGTCCCGACGCGGGGGAGGTGCGCCTCGACGACGCTCCCATCCGGGCGCTGTCCCCCGCGGGTCTCGCCCGGGTG
ATGGCGGTCGTGTGGCAGGGCGGCCAGGTCAGCGGCGACGTCACGGTGCGGCGCCTCATCGGTTACGGACGCTACGCCTA
TCTGCCCTGGTGGCGGCTGAACCCCTCCGGGCGCGACCCCGCGATCGAGGAGGCCATGGCCGTCACCGGGGTCGCCCACC
TGTCCCACCGGCTGGTGGCGTCCCTGTCGGGCGGCGAACGGCAACGCGTGTGGATTGCCATGGCCCTGGCCCAGCAGCCG
AGGGTGCTGCTGCTGGACGAACCCACCACCTACCTCGACATCGCCCACCAGCTCGACGTGCTGGAGCTGATCCGCGACCT
GAACCAGCGCAGCGGCCTCACCGTCATCACGGTGCTGCACGACCTGGCCCAGGCCGCCCGCTACTGCGACCGCTGCGTCG
TGATGGGCGAGGGCCGGGTCCGGACGGATGGCGTCCCGGCCGAGGCGCTGTCCGCCGGTCAGATCGAACGAAACTTCGCC
GTGAACGCCTGGGTCACCACCGACCCCAGCGCCGGCCATCCGGTGATCGTCCCGCGGCACCGGGTGAGCGCGGCGCCGCC
GGAGAACCGGGAAACGGAAGGAGCACCATGA

Protein sequence : 
MMTARISARGLRLSLGGRRILDGIDLDFAPGRVHGILGPNGCGKTTLIRALSGALRPDAGEVRLDDAPIRALSPAGLARV
MAVVWQGGQVSGDVTVRRLIGYGRYAYLPWWRLNPSGRDPAIEEAMAVTGVAHLSHRLVASLSGGERQRVWIAMALAQQP
RVLLLDEPTTYLDIAHQLDVLELIRDLNQRSGLTVITVLHDLAQAARYCDRCVVMGEGRVRTDGVPAEALSAGQIERNFA
VNAWVTTDPSAGHPVIVPRHRVSAAPPENRETEGAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 4e-38 44
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-44 43
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-41 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-43 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF9154_2921 YP_006513057.1 putative iron(III) dicitrate ABC transporter, ATP-binding protein FecE BAC0164 Protein 2e-44 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF9154_2921 YP_006513057.1 putative iron(III) dicitrate ABC transporter, ATP-binding protein FecE VFG1042 Protein 2e-44 43
HMPREF9154_2921 YP_006513057.1 putative iron(III) dicitrate ABC transporter, ATP-binding protein FecE VFG0925 Protein 2e-44 41