|
Name : HMPREF9154_2157 (HMPREF9154_2157) Accession : YP_006512360.1 Strain : Propionibacterium propionicum F0230a Genome accession: NC_018142 Putative virulence/resistance : Unknown Product : oligopeptide/dipeptide transporter, C-terminal domain protein Function : - COG functional category : - COG ID : - EC number : - Position : 2350576 - 2352324 bp Length : 1749 bp Strand : - Note : - DNA sequence : GTGAACGAGACAATCCCCCCCACCCAGGAAACCGAATCGGTGCTCCAGTTCCAGGAACTGGATGTCAACTTCCGCACCGA GTTCGGGCGGGTCCACGCCGTCAAGGGCGTCTCCTTGGCGGTCAGGCCGGGCGAGGTGGTCGCCCTGGTGGGTGAATCCG GTTCCGGCAAGTCGGTCACCGCGACCACGGCCCTCGGACTGCTGCCGAAGACCGCCCGTATCACGGGGGAGACGATGGTG GCCGACAAGACCATCTCGAAACTCACCCCCCGGCAGCTGCGTGGCCTGCGTGGCAACCGCGTGGCCATGGTCTTCCAGGA ACCGATGACCGCCCTCAACCCGGTCATCAAGATCGGTGAACAACTCACCGAATCAATGGAGGTGCACAACGTCGCCCACG GCGCAGAGGCGTGGCAGAAGGCCATCGACCTGCTCAACGCCGTCGGCATCCCGAACGCGGAACGACGCGTCAAGCAGTAC CCCCACGAGCTGTCGGGCGGCATGCGGCAGCGCGTGGTGATCGCCATGGCGCTGGCCTGCGATCCCGAGGTGATCATCGC CGACGAACCCACCACGGCCCTCGACGTCACCGTGCAGGCCGACATCCTGGACCTGCTGCGGTCGCTGAAGGAGAAACTGA ACACCGGAATCCTGCTCATCACCCACAACATGGGGGTGGTGGCCGACATGGCGGACCGGGTCGCGGTGATGTTCAAAGGC AACATCGTGGAGCGCGGCACCGTGGAGGAGGTGCTGCTCAAACCGCAGCACCCCTACACCAAGAAACTACTGGCCGCGGT TCCCCACCTCGGGGAGGGGCACGGCCAGTTCGGCTCCGCCCCGCGCGAGGTACCCGGGGACGCCGAATCGGCCCTCGAGG TCAACGAACTGGTGGTGGAGTACAAACGTGCGGGCCGCAAGCCGTTCCGGGCCGTCGACGGCGTCACCTTCGACGTGAAA CGCGGCGAGATCGTCGGCCTGGTGGGCGAGTCGGGTTCCGGCAAGTCGACCATCGGCCGGGCCCTGCTGGGGTTGATCCC GTCGGCCGGGGGAAACGTTAAGGTGCTCGGCCAGGAACTGGTCCAGGGACACGGCCGCAGGAAGGTTTCGCAGGGCAAGA GCCTGAAGGGCCTGCGGCGCCGCGTCGGGGTGATCTTCCAGGACCCTGCGGCCTCCCTCAACCCGCGGCTGCCCGTCGGC GACGTCATCTCCGAACCCCTGGAGGTGCACAGGATCGGGAACAAGGCGTCGCGGCAGAAGCGGGTCTATGAACTGCTGGA GGCCGTCGAACTCCCGAGAAGCGCCTTCAACCGCTACCCGCACGAGCTGTCCGGCGGTCAGCGGCAGCGCGTCTCGATCG CCCGCGCGCTTTCATTGAGCCCGGATCTGCTGGTCGCCGACGAACCCACCTCGGCTCTCGACGTTTCGGTGCAGGCCCAG GTGCTGGGAATGCTGACCGATCTGCAGCGGGACTTCGGGTTCGCGTGCCTGTTCATCAGCCATGACCTGGCCGTGATCGA CTCGCTCGCGCACCGCGTCGTCGTGATGCAGTACGGCAAGATCGTCGAGAAGGGGGATCGGCAGCGGGTGCTGCTCGACC CGCAGGAGGAGTACACCAAGCGTCTCCTGGCGGCTGCGCCCGTTCCGGACCCTATCGAGCAGCGCAGGCGCCGCGAGGAA CGCCACCGCCTGCTGAAGGCGCTGGGCGACGAGATCGTGGAACTCGACACCCGCGAACTGGACCAGTAG Protein sequence : MNETIPPTQETESVLQFQELDVNFRTEFGRVHAVKGVSLAVRPGEVVALVGESGSGKSVTATTALGLLPKTARITGETMV ADKTISKLTPRQLRGLRGNRVAMVFQEPMTALNPVIKIGEQLTESMEVHNVAHGAEAWQKAIDLLNAVGIPNAERRVKQY PHELSGGMRQRVVIAMALACDPEVIIADEPTTALDVTVQADILDLLRSLKEKLNTGILLITHNMGVVADMADRVAVMFKG NIVERGTVEEVLLKPQHPYTKKLLAAVPHLGEGHGQFGSAPREVPGDAESALEVNELVVEYKRAGRKPFRAVDGVTFDVK RGEIVGLVGESGSGKSTIGRALLGLIPSAGGNVKVLGQELVQGHGRRKVSQGKSLKGLRRRVGVIFQDPAASLNPRLPVG DVISEPLEVHRIGNKASRQKRVYELLEAVELPRSAFNRYPHELSGGQRQRVSIARALSLSPDLLVADEPTSALDVSVQAQ VLGMLTDLQRDFGFACLFISHDLAVIDSLAHRVVVMQYGKIVEKGDRQRVLLDPQEEYTKRLLAAAPVPDPIEQRRRREE RHRLLKALGDEIVELDTRELDQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-110 | 44 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-75 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-75 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-75 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-75 | 43 |
