Gene Information

Name : HMPREF9154_0201 (HMPREF9154_0201)
Accession : YP_006510552.1
Strain : Propionibacterium propionicum F0230a
Genome accession: NC_018142
Putative virulence/resistance : Virulence
Product : response regulator receiver domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 202968 - 203633 bp
Length : 666 bp
Strand : +
Note : -

DNA sequence : 
GTGAGCAGCATATTGATCATCGAGGACGAACCCAGGATCGCTGGGTTCATAGCCAAGGGGTTGAAGTCGGCAGGATTCAC
CTCAGAGACCACGCCCTCCGGTGAGATGGGGGCCACGCTGGCGGTGCACGGCAACTTCTCGTTGATCATCCTGGATGTCG
GGTTGCCGGACATCGACGGGTTCGAGGTGCTGGAACGCATCCGCGGCCAGGGGGTGGCGACGCCGGTGATCATGCTCACA
GCCCGCTCGTCGGTGGCCGACCGGGTGGCGGGGCTGGAGGGCGGTGCCGACGACTACATGCCGAAACCTTTCTCCTTCGA
GGAACTGCTGGCCCGGATCCGGCTGCGGCTCAGGACCGAACCCGAACCCGCGAGAACAACGGTCAACTACCTGGAACATC
GCGGCCTGGTGCTGGACTACCGCACCCGTCGCGCCCAGGTAGACGGCCAGTGGGTGGACCTGTCTGCCCGCGAGTTCACC
CTCGCGGAGGTGTTCCTGCGCAACCCGGGCCAGGTGCTCAGCCGCGAGCAACTCCTCAGCAACGTCTGGGGTTTCGACTT
CGACCCCGGCTCGAACATCGTCGACGTCTACGTCTCCTACCTGCGCAACAAGCTGGGCAAACAACGCTTCGAAACAGTCC
GGGGAATGGGCTACCGCCTGGTGTGA

Protein sequence : 
MSSILIIEDEPRIAGFIAKGLKSAGFTSETTPSGEMGATLAVHGNFSLIILDVGLPDIDGFEVLERIRGQGVATPVIMLT
ARSSVADRVAGLEGGADDYMPKPFSFEELLARIRLRLRTEPEPARTTVNYLEHRGLVLDYRTRRAQVDGQWVDLSAREFT
LAEVFLRNPGQVLSREQLLSNVWGFDFDPGSNIVDVYVSYLRNKLGKQRFETVRGMGYRLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-30 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF9154_0201 YP_006510552.1 response regulator receiver domain-containing protein BAC0197 Protein 2e-31 44
HMPREF9154_0201 YP_006510552.1 response regulator receiver domain-containing protein AE015929.1.gene1106. Protein 3e-30 43
HMPREF9154_0201 YP_006510552.1 response regulator receiver domain-containing protein HE999704.1.gene1528. Protein 9e-35 43
HMPREF9154_0201 YP_006510552.1 response regulator receiver domain-containing protein BAC0638 Protein 3e-29 43
HMPREF9154_0201 YP_006510552.1 response regulator receiver domain-containing protein NC_013450.8614146.p0 Protein 4e-32 42
HMPREF9154_0201 YP_006510552.1 response regulator receiver domain-containing protein NC_002951.3238224.p0 Protein 4e-32 42
HMPREF9154_0201 YP_006510552.1 response regulator receiver domain-containing protein NC_007793.3914065.p0 Protein 4e-32 42
HMPREF9154_0201 YP_006510552.1 response regulator receiver domain-containing protein NC_002758.1121390.p0 Protein 4e-32 42
HMPREF9154_0201 YP_006510552.1 response regulator receiver domain-containing protein NC_010079.5776364.p0 Protein 4e-32 42
HMPREF9154_0201 YP_006510552.1 response regulator receiver domain-containing protein NC_002952.2859858.p0 Protein 4e-32 42
HMPREF9154_0201 YP_006510552.1 response regulator receiver domain-containing protein NC_007622.3794948.p0 Protein 4e-32 42
HMPREF9154_0201 YP_006510552.1 response regulator receiver domain-containing protein NC_003923.1003417.p0 Protein 4e-32 42
HMPREF9154_0201 YP_006510552.1 response regulator receiver domain-containing protein BAC0125 Protein 3e-32 42
HMPREF9154_0201 YP_006510552.1 response regulator receiver domain-containing protein BAC0083 Protein 2e-34 42
HMPREF9154_0201 YP_006510552.1 response regulator receiver domain-containing protein CP001918.1.gene5135. Protein 4e-16 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF9154_0201 YP_006510552.1 response regulator receiver domain-containing protein VFG0596 Protein 2e-30 43
HMPREF9154_0201 YP_006510552.1 response regulator receiver domain-containing protein VFG1389 Protein 3e-32 43
HMPREF9154_0201 YP_006510552.1 response regulator receiver domain-containing protein VFG1390 Protein 4e-32 41