Gene Information

Name : pin (LPO_p0086)
Accession : YP_006510304.1
Strain :
Genome accession: NC_018141
Putative virulence/resistance : Unknown
Product : site-specific DNA recombinase; e14 prophage
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 73975 - 74523 bp
Length : 549 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3891522, 3894006, 6310572; Product type h : extrachromosomal origin

DNA sequence :
ATGAAAATTGGGTATGCTCGCGTTTCAACCACGGATCAAAATTTAGAGTTGCAATTAGTTGCACTAAAAGAAGCTGGTTG
TAAACGTATCTATCAGGAAAAAATTTCTGGTGCAAAAAGAGATCGTCCAGAATTACAACGATTACTTGATCAGCTTCGAC
CTGAAGATGTAGTCGTTGTTTGGAAATTGGATAGATTGGCGCGTTCAACCCAGCATTTATTAGAATTAATAGACTGCATA
AGAACAACAGAGGCTTCCTTTTGTTCGCTTTCCGAGCCTTGGGCAGATACCACTTCTCATGCCGGTAAAATGATCATGAC
CGTATTCGCAGGTATTGCAGAATTTGAGCGTGACTTAATTCGTGAACGTACTGGTGCGGGTCGCGCAGCTGCAAAGCAAC
GTGGAGTTCGTTTTGGACGACCTGAAAAAATGAATAAAGAACAAAAGTCATTGGCCAAGCGGCTTTTGCAAGAAGATAAA
TCGGTAAGTGAGATTGCAAAAACGTTTAATGTCCATAAAGCAACAATTTATCGTTTACAACAAGAATAA

Protein sequence :
MKIGYARVSTTDQNLELQLVALKEAGCKRIYQEKISGAKRDRPELQRLLDQLRPEDVVVVWKLDRLARSTQHLLELIDCI
RTTEASFCSLSEPWADTTSHAGKMIMTVFAGIAEFERDLIRERTGAGRAAAKQRGVRFGRPEKMNKEQKSLAKRLLQEDK
SVSEIAKTFNVHKATIYRLQQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
1_365 CAJ77091.1 Resolvase N-term Not tested AbaR1 Protein 5e-29 50
resX ADZ05753.1 invertase/resolvase Not tested AbaR10 Protein 5e-29 50
resX ADZ05809.1 invertase/resolvase Not tested AbaR20 Protein 5e-29 50
ACICU_00231 YP_001844890.1 site-specific recombinase, DNA invertase Pin protein Not tested AbaR20 Protein 8e-29 50
resX AGK36651.1 partial invertase/resolvase Not tested AbaR26 Protein 5e-29 50
resX ACN81037.1 partial invertase/resolvase Not tested AbaR5 Protein 8e-29 50
res AGF34985.1 resolvase Not tested SGI1 Protein 4e-31 48
res AGF35025.1 resolvase Not tested SGI1 Protein 4e-31 48
res AGF35059.1 resolvase Not tested SGI1 Protein 4e-31 48
res AGK06929.1 resolvase Not tested SGI1 Protein 4e-31 48
res AGK06966.1 resolvase Not tested SGI1 Protein 4e-31 48
res AGK07012.1 resolvase Not tested SGI1 Protein 4e-31 48
res AGK07070.1 resolvase Not tested SGI1 Protein 4e-31 48
res AAK02044.1 resolvase Not tested SGI1 Protein 4e-31 48
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 4e-31 48
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 2e-33 45
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 5e-34 45
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 5e-34 45
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 3e-27 45
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 4e-27 45
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 4e-27 45
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 3e-25 43