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Name : pin (LPO_p0086) Accession : YP_006510304.1 Strain : Genome accession: NC_018141 Putative virulence/resistance : Unknown Product : site-specific DNA recombinase; e14 prophage Function : - COG functional category : - COG ID : - EC number : - Position : 73975 - 74523 bp Length : 549 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3891522, 3894006, 6310572; Product type h : extrachromosomal origin DNA sequence : ATGAAAATTGGGTATGCTCGCGTTTCAACCACGGATCAAAATTTAGAGTTGCAATTAGTTGCACTAAAAGAAGCTGGTTG TAAACGTATCTATCAGGAAAAAATTTCTGGTGCAAAAAGAGATCGTCCAGAATTACAACGATTACTTGATCAGCTTCGAC CTGAAGATGTAGTCGTTGTTTGGAAATTGGATAGATTGGCGCGTTCAACCCAGCATTTATTAGAATTAATAGACTGCATA AGAACAACAGAGGCTTCCTTTTGTTCGCTTTCCGAGCCTTGGGCAGATACCACTTCTCATGCCGGTAAAATGATCATGAC CGTATTCGCAGGTATTGCAGAATTTGAGCGTGACTTAATTCGTGAACGTACTGGTGCGGGTCGCGCAGCTGCAAAGCAAC GTGGAGTTCGTTTTGGACGACCTGAAAAAATGAATAAAGAACAAAAGTCATTGGCCAAGCGGCTTTTGCAAGAAGATAAA TCGGTAAGTGAGATTGCAAAAACGTTTAATGTCCATAAAGCAACAATTTATCGTTTACAACAAGAATAA Protein sequence : MKIGYARVSTTDQNLELQLVALKEAGCKRIYQEKISGAKRDRPELQRLLDQLRPEDVVVVWKLDRLARSTQHLLELIDCI RTTEASFCSLSEPWADTTSHAGKMIMTVFAGIAEFERDLIRERTGAGRAAAKQRGVRFGRPEKMNKEQKSLAKRLLQEDK SVSEIAKTFNVHKATIYRLQQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| resX | ADZ05809.1 | invertase/resolvase | Not tested | AbaR20 | Protein | 5e-29 | 50 |
| ACICU_00231 | YP_001844890.1 | site-specific recombinase, DNA invertase Pin protein | Not tested | AbaR20 | Protein | 8e-29 | 50 |
| resX | AGK36651.1 | partial invertase/resolvase | Not tested | AbaR26 | Protein | 5e-29 | 50 |
| resX | ACN81037.1 | partial invertase/resolvase | Not tested | AbaR5 | Protein | 8e-29 | 50 |
| 1_365 | CAJ77091.1 | Resolvase N-term | Not tested | AbaR1 | Protein | 5e-29 | 50 |
| resX | ADZ05753.1 | invertase/resolvase | Not tested | AbaR10 | Protein | 5e-29 | 50 |
| res | AGK06966.1 | resolvase | Not tested | SGI1 | Protein | 4e-31 | 48 |
| res | AGK07012.1 | resolvase | Not tested | SGI1 | Protein | 4e-31 | 48 |
| res | AGK07070.1 | resolvase | Not tested | SGI1 | Protein | 4e-31 | 48 |
| res | AAK02044.1 | resolvase | Not tested | SGI1 | Protein | 4e-31 | 48 |
| tnpR | ACD85600.1 | TnpR resolvase | Not tested | SGI2 | Protein | 4e-31 | 48 |
| res | AGF34985.1 | resolvase | Not tested | SGI1 | Protein | 4e-31 | 48 |
| res | AGF35025.1 | resolvase | Not tested | SGI1 | Protein | 4e-31 | 48 |
| res | AGF35059.1 | resolvase | Not tested | SGI1 | Protein | 4e-31 | 48 |
| res | AGK06929.1 | resolvase | Not tested | SGI1 | Protein | 4e-31 | 48 |
| binR | YP_254224.1 | resolvase/integrase BinR | Not tested | ¥ðSh1 | Protein | 2e-33 | 45 |
| SH1761 | YP_253676.1 | DNA-invertase | Not tested | ¥ÕSh1 | Protein | 5e-34 | 45 |
| binL | YP_254524.1 | DNA-invertase | Not tested | ¥ðSh2 | Protein | 5e-34 | 45 |
| 1_318 | CAJ77076.1 | Resolvase | Not tested | AbaR1 | Protein | 3e-27 | 45 |
| ABTW07_3871 | YP_005797119.1 | resolvase IS26 | Not tested | AbaR4e | Protein | 4e-27 | 45 |
| tnpR | ACN81015.1 | TnpR resolvase | Not tested | AbaR5 | Protein | 4e-27 | 45 |
| CDBH8_0918 | YP_005160010.1 | transposase-like protein | Not tested | Not named | Protein | 3e-25 | 43 |
