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Name : cadA (LPO_p0084) Accession : YP_006510302.1 Strain : Genome accession: NC_018141 Putative virulence/resistance : Resistance Product : cadmium-transporting ATPase (Cadmium efflux ATPase) Function : - COG functional category : - COG ID : - EC number : 3.6.3.3 Position : 71557 - 73464 bp Length : 1908 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology DNA sequence : ATGGGCTGCTCCACTTGTCCTTCTCACAAAGAACCAATGCCCAAACTGTGGCATAATCCTAAAGTCATTACGGCAGCAAT AGCCGGTATATTATTAACTATTGGTTTTGTAGGCTCATATTTGACACTACCAAGGATAATTGCTAACGGGTTTTACATAG GCGCGGTGTTAATTGGTGGATATTATTTCGCACGGGAAGCTATAGAAGAATTTTTCAAAGAACATGAAATCGGTATTGAG TTTTTGATGTCTACCGCTGCTATTGTTGCTGGTGTGATGGGACAATGGGCAGAATCGGCAACACTGGTTTTTTTATATTC TATTTCTGAAGCAGCAGAGGGTTATGCTGGTGAAAGGGCGCGACATGCTATCAGAGTATTGATGGAACTTGCCCCAAAAT CCGCATTAGTCCGACGTAATAATAGCGAGTTCCTAATACCTTTAGAAGACATTCAAATTGGAGATGAGTTTATTGTTCGT CCTGGTGAAAGCATCGCTACAGATGGAGAGGTCATATCTGGACATTCTAGTGTAAACCAAGCGCCTATCACGGGTGAATC AATTCCTGTTGAGAAATTTGTGGGAAATAAAGTATTTTCTGCAACTATTAACGGCGAGGGGACTCTTACTATTCGCGCTA CCAAAAAATTTGCTGAGAACACGTTATCTCGTATTATTTTTCTTGTTGAAAAAGCACAGGATAAAAAAGGTCGCAGTCAA CGATTTATAGAGCGTTTTGGCAATCTCTACAGTCCATTCGTTCTTTTAGCAGGGGTACTAATAGCTACCCTACCTCCTCT ATTTGGGCTGCATTGGCAAGAATGGGTGCTACGTGCAACGGTGTTTATTGTTGCAGCTGCACCATGTGCTTTAGTAATTT CTATCCCAATTACCCTTGTAGCTGCTCTTGGTACAGCCAGTCGAAACGGAATATTACTTAAGGGTGGGATATATTTAGAA AAATTGGTTCAAATAAAGGTTATTGCGCTTGATAAAACAGGAACCTTAACACAAGGACAACCCAAGGTCACCGATATCAT TTCGTTAAATAATTATACTCAGAACCAAATATTAAATGTAGCTGCCACCCTTGAATCGCGTTCCCAGCATCCACTGGCAC ATGCCATTTTACAACAAGCAAAGGCAGAAAGTGTTGCATATAAACCTGTTGAACATTTTAAGTCATTGACTGGTTCAGGG GTTCAGGGTTTTATAAATGGAGAACAATTTTATATTGGCAATCCAAAATTATTTATTGATATGGGTCTATTGGTAGAAAC TGTAATTCAAGAAATAAATAAATTACAGACCGTTGGAAAGACTGTCGTATTAGTAGGAACAGATAAGGAAATTCTCGGTT TAATTGCAATTACTGATCCTCTAAGATCTACAGCAAGGCAGATGGTATCGTCCCTAAAATTGATGGGTATTGAGCGTGTT GTTATGCTCACTGGAGATAACTCGATAACTGCCGCGTCAATTGGAGTTCAAGCAGGTGTAGATGAAGTATTCTCTGATTT ATCACCAGAAGATAAGACACGAAAAATTGAGGAACTGGAAAGACGTTACGGTAAGGTAATGATGGTTGGCGATGGAGTAA ATGATGCTCCAGCACTTGCAGCAGCACATGTAGGAGTTGCAATGGGCGCCGCTGGAACCGATGTTGCATTAGAAACTGCG GATGTAGCATTAATGGGTGATAATTTATTAAAATTACCTTATCTCATCGAGTTTAGTCATCGAACCTGGAATATAATTTT ACAAAATTTAGGACTATCTATAATTGTTATTAGCTCTCTTATTGTCGGGGCGGTAACTGGCTATTTTACGTTGCCAATAG CAGTTTTAGCCCATGAAATAAGTGAGCTTATTGTTATTGCAAGTGGTCTTCGCATGTTAAAATCTTAA Protein sequence : MGCSTCPSHKEPMPKLWHNPKVITAAIAGILLTIGFVGSYLTLPRIIANGFYIGAVLIGGYYFAREAIEEFFKEHEIGIE FLMSTAAIVAGVMGQWAESATLVFLYSISEAAEGYAGERARHAIRVLMELAPKSALVRRNNSEFLIPLEDIQIGDEFIVR PGESIATDGEVISGHSSVNQAPITGESIPVEKFVGNKVFSATINGEGTLTIRATKKFAENTLSRIIFLVEKAQDKKGRSQ RFIERFGNLYSPFVLLAGVLIATLPPLFGLHWQEWVLRATVFIVAAAPCALVISIPITLVAALGTASRNGILLKGGIYLE KLVQIKVIALDKTGTLTQGQPKVTDIISLNNYTQNQILNVAATLESRSQHPLAHAILQQAKAESVAYKPVEHFKSLTGSG VQGFINGEQFYIGNPKLFIDMGLLVETVIQEINKLQTVGKTVVLVGTDKEILGLIAITDPLRSTARQMVSSLKLMGIERV VMLTGDNSITAASIGVQAGVDEVFSDLSPEDKTRKIEELERRYGKVMMVGDGVNDAPALAAAHVGVAMGAAGTDVALETA DVALMGDNLLKLPYLIEFSHRTWNIILQNLGLSIIVISSLIVGAVTGYFTLPIAVLAHEISELIVIASGLRMLKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 3e-112 | 45 |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 2e-109 | 44 |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 2e-109 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cadA | YP_006510302.1 | cadmium-transporting ATPase (Cadmium efflux ATPase) | BAC0100 | Protein | 6e-70 | 44 |
| cadA | YP_006510302.1 | cadmium-transporting ATPase (Cadmium efflux ATPase) | BAC0092 | Protein | 9e-93 | 43 |
| cadA | YP_006510302.1 | cadmium-transporting ATPase (Cadmium efflux ATPase) | BAC0298 | Protein | 3e-85 | 42 |
| cadA | YP_006510302.1 | cadmium-transporting ATPase (Cadmium efflux ATPase) | BAC0124 | Protein | 2e-76 | 41 |
