Gene Information

Name : LPV_0199 (LPV_0199)
Accession : YP_006507348.1
Strain : Legionella pneumophila HL06041035
Genome accession: NC_018140
Putative virulence/resistance : Unknown
Product : Integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 210803 - 211630 bp
Length : 828 bp
Strand : -
Note : -

DNA sequence :
ATGTGCCAACTCCTGGGCATTACACGGCATGGATATTACAGTTATCAGCAACGCCAGAGAAATAAACCAGATGATCCTGA
ACATGAGGAGGTTATTGATTGTGTGAAGAAAATAGCTGAGGCGAGCCAGTATTGTTATGGAAGTCGCAGGATGAAGAATG
CTTTAAATGCATTAGGTTATCCAGTAGGTCGAAGACGAGCTCAAAGTTTAATGAAAGAAGCCAAAGTTTTTGTTCGATAT
CGAAAGAAATATAAGGTGACTACCAATAGCAACCATAAACAACCGGTTTATGAAAATGTATTGAATAAGCAATTTCATAC
AGATAAACCTAATAAAGCCTACGTATCAGATATTACCTATATCTGGACGCAGGAAGACTGGCTTTATTTAGCAGTCGTTC
TGGATTTATTTTCAAGGAAGGTGGTTGGTTGGAGCATGGGATCCAGAATGAAAGCAACATTGGTTTGTGATGCTCTGAAT
ATGGCAATTTGGCAGCGAAAACCTCCATCAGGGCTTATTGTTCATTCCGATAGAGGGGCTCAGTATGCTAGTTGCCAATA
CCGCAATTTATTAACGGGCAAAGGATATATTGGTAGCATGAGCAGAAAAGGTGATTGCTGGGATAACAGCGTTGTTGAAA
GCTTCTTTGGCAGCTTAAAACAAGAGCGAGTTCAGTGGCGAAATTATCAAACTCGATGGGAGGCTCAACAGGACATTTTG
AATTACATCACCATGTTCTATAACAGTCACAGATTACATTCATATTTGGGTTATTTAAGTCCAAATCAATTTGAAAAACA
GAGCGATTTTTTAATGAAAGTTGCTTAA

Protein sequence :
MCQLLGITRHGYYSYQQRQRNKPDDPEHEEVIDCVKKIAEASQYCYGSRRMKNALNALGYPVGRRRAQSLMKEAKVFVRY
RKKYKVTTNSNHKQPVYENVLNKQFHTDKPNKAYVSDITYIWTQEDWLYLAVVLDLFSRKVVGWSMGSRMKATLVCDALN
MAIWQRKPPSGLIVHSDRGAQYASCQYRNLLTGKGYIGSMSRKGDCWDNSVVESFFGSLKQERVQWRNYQTRWEAQQDIL
NYITMFYNSHRLHSYLGYLSPNQFEKQSDFLMKVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 2e-44 44
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-44 44
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-44 44
unnamed AAF09022.1 unknown Not tested SHI-O Protein 1e-40 42
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 9e-41 42
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 8e-41 42
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 8e-41 42
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 8e-41 42
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 8e-41 42
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 2e-41 42
unnamed AAF09030.1 unknown Not tested SHI-O Protein 9e-41 42
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 1e-40 42
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 1e-39 42
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 2e-39 41
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 2e-38 41
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 4e-31 41
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 4e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LPV_0199 YP_006507348.1 Integrase VFG1706 Protein 5e-41 42
LPV_0199 YP_006507348.1 Integrase VFG1484 Protein 2e-31 41