Gene Information

Name : lspF (LPV_1476)
Accession : YP_006508516.1
Strain : Legionella pneumophila HL06041035
Genome accession: NC_018140
Putative virulence/resistance : Virulence
Product : general secretory pathway component, cryptic
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1495594 - 1496793 bp
Length : 1200 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 7896718, 96256608; Product type t : transporter

DNA sequence : 
ATGGGCGCCTACCAATATCAAGCGCTAAAAGTGAATGGCAGCATTAGCAAAGGTGTAATAGAAGCTGATTCTGAACGTCA
TGCACGTCAATTATTGCGAGAACAAGGACTAATCCCTACTCAAGTCCAAACATTAACCCAGCAACGTGCTGCCAGCAGCA
AAAGTAAAGTTTCTGCGGCTGATTTGGCATTACTCACGAGACAGCTGGCAACACTTCTGGCTGCCGGTATTCCTGTTGAA
GAATCATTGCGCGGGGTCAGCGAACAAACAGAAAAAGACAAAGTCAGAGAGCTTATTATCGGAGTTCGCTCTAAAGTATT
GGAAGGGTATGGTCTTGCTCAGGCAATGGCTCAATATCCCAATGCCTTTCCAGAACTATACCGGGCAACAGTTGGCTCAG
GCGAGCAGACAGGGCGTCTTGATGTCGTTTTAGAAAAATTAGCTGATTATACTGAAAAACAACAACAAACTCGACAGAAA
GTGCAGCAAGCCTTGATTTACCCATTGCTCATGATCATTGTTTCTACTGCCATTATCAGTTTTTTACTTACTTTTGTCGT
CCCTAAAATTATTGATGTGTTTACCGAAAGTGGCCAAACACTACCACCAATGACGCAATTGCTTATTAACTTGAGCCAAT
TTATTAAATCTTATGGTTTGTATAGTCTAGTGACAATAATTGTGGCTCTAATTGGATTTAAAAAGAGCCTCAGTAATATA
AAAATTAAAACAGCATGGCATCAATTCATGCTTAAACTACCTATCGTGTCTTATTTGGTTAAAACAATTAATGTCGCGCG
ATATATTCACACGTTTGGAATTCTATTTGCAGCGGGAGTCAGTGTACTTGAAACCATGCGTGTTTCTTCAAGTTTGGTAA
CCAATATCGTGATGAGACAGGCTTTTGATTTAGCTACTCTACGAGTCCGTGAAGGAAGTGGAATCAGTGAGGCCCTCAAA
GAAACAAAATTCATTAGCCCCATGGCTATCCATCTGATAGCCAGTGGTGAGAAAAGCGGTCAACTTTCAGAAATGATGGA
ACGCTCAGCGTCTCATTTAGATAATGAAGTAAACCGACTGATTGAAACATCCTTAACTTTATTAGAACCTATGGTTATTC
TATTAATGGGTGCTGTTGTTTTATTTATTGTACTAGCGACCTTATTACCTATTTTTTCAATGGAACAATTAGTTGCCTGA

Protein sequence : 
MGAYQYQALKVNGSISKGVIEADSERHARQLLREQGLIPTQVQTLTQQRAASSKSKVSAADLALLTRQLATLLAAGIPVE
ESLRGVSEQTEKDKVRELIIGVRSKVLEGYGLAQAMAQYPNAFPELYRATVGSGEQTGRLDVVLEKLADYTEKQQQTRQK
VQQALIYPLLMIIVSTAIISFLLTFVVPKIIDVFTESGQTLPPMTQLLINLSQFIKSYGLYSLVTIIVALIGFKKSLSNI
KIKTAWHQFMLKLPIVSYLVKTINVARYIHTFGILFAAGVSVLETMRVSSSLVTNIVMRQAFDLATLRVREGSGISEALK
ETKFISPMAIHLIASGEKSGQLSEMMERSASHLDNEVNRLIETSLTLLEPMVILLMGAVVLFIVLATLLPIFSMEQLVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspF CAE85232.1 GspF, hypothetical type II secretion protein Not tested PAI V 536 Protein 6e-63 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lspF YP_006508516.1 general secretory pathway component, cryptic VFG1870 Protein 1e-165 99
lspF YP_006508516.1 general secretory pathway component, cryptic VFG0181 Protein 1e-78 45
lspF YP_006508516.1 general secretory pathway component, cryptic VFG2049 Protein 1e-62 41