Gene Information

Name : abcT (LPO_3246)
Accession : YP_006507075.1
Strain : Legionella pneumophila Lorraine
Genome accession: NC_018139
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3374042 - 3374731 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence : 
ATGATTGACAGACCTTTAATCCAACTTTCTGATTTGGTGAAGACTTATCATCTTGAGGGTATCAGTACCACGGTATTAAA
AGCAGTGTCTTTGACCGTAAACGAAGGTGATTTGCTCGCTATTGTCGGTGCGTCCGGCTCTGGTAAATCCACGTTAATGA
ACATCATAGGCTTATTAGATAAACCGGATGCAGGAACTTATACCTTAAATAATAGAAATGTGGCCAGCTTAAGCGACGAT
GAGGCGGCTGATTTGCGCAATCAAAATATAGGTTTTGTTTTTCAGCAGTTTAATTTGCTTCCTCGTTTTACAGCGATGCA
AAATGTGGCTTTGCCTTTGACGTACCGAGGGGTCAATCCCACTTTGATAAAAGAAAAAGTGGAGCAAGCACTGGATAAAG
TTGGAATGCGCCAATACATCCGCCACAGGCCAACCCAATTATCTGGCGGTCAGCAGCAGCGAGTCGCTATCGCCAGAGCG
TTAGTGACCGACCCACAGGTTATTCTCGCTGATGAGCCGACCGGTGCGCTGGATTCAAGAACAGGTAGCGAGGTAATGAA
TTTGTTTTTGGCCTTACACCAGGAAGGCCGGACTATCATCATGGTGACCCATGATGAGCACGTGGCAGCACAATGCAAAC
GACGAATAACCTTAGCCGATGGGGCAATTATAGCGGAGTCCGGGCAATGA

Protein sequence : 
MIDRPLIQLSDLVKTYHLEGISTTVLKAVSLTVNEGDLLAIVGASGSGKSTLMNIIGLLDKPDAGTYTLNNRNVASLSDD
EAADLRNQNIGFVFQQFNLLPRFTAMQNVALPLTYRGVNPTLIKEKVEQALDKVGMRQYIRHRPTQLSGGQQQRVAIARA
LVTDPQVILADEPTGALDSRTGSEVMNLFLALHQEGRTIIMVTHDEHVAAQCKRRITLADGAIIAESGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
abcT YP_006507075.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-57 53
abcT YP_006507075.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-45 49
abcT YP_006507075.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 6e-36 42