Gene Information

Name : kdsB (LPO_1995)
Accession : YP_006505928.1
Strain : Legionella pneumophila Lorraine
Genome accession: NC_018139
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.38
Position : 2060887 - 2061639 bp
Length : 753 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3023327, 89193678; Product type e : enzyme

DNA sequence :
ATGAGCCATAATTTTCATGTGATTATACCAGCCAGATATCACTCCAGTCGTTTTCCAGGTAAATTACTTCAGGAAATTAA
CGGTATTACCGTGATTGAACGAGTTTACAGGCAAGCACTTCTGGCAGAACCAAAGTCGGTGATTATTGCCACTGATCATG
ATGAGATAGCTGACCGTGCAATCCAATTTGGAGCGGAGGTTGTAATCACTTCACATACGCACCAAACTGGAACTGATCGA
ATTGCGGAGGTTGTCGCCAAGGGTAGCTTTGCTCCTGATGACGTCATTGTCAATGTGCAAGGTGATGAGCCATTTATCCG
ACCCAAATTAATTCAACAAGTTGCTTGCTCTTTAACAAAGACAAAGGCGCCTGTGTCTACTTTATGCTGGCCTATTAGCA
GCCTTCAAATATTAAATAACCCTAATGTGGTTAAAGTGGTATGCACTCGAGATAATCACGCTCTTTATTTTTCAAGAAGC
GCGATACCTTTTCACAGAGATGATAAAAACGCTTATTCCAATACCTTCAGGCATATCGGTTTATATGCTTATCGTGCTGC
CTTTTTACTGGAATTTGTTAGCTGGCCGCCCTGTACCTTGGAACAAATAGAGTGTTTGGAGCAATTGCGCATCCTATGGT
CAGGTTTCTCTATCCGGGTTGATGAGGCTTGCGAAGAACCTTTACAGGATATTAATACAAAAGAAGATTTGATTTTGGCT
CAGCAATATTTTCTTGATACTTTCAATGTATAA

Protein sequence :
MSHNFHVIIPARYHSSRFPGKLLQEINGITVIERVYRQALLAEPKSVIIATDHDEIADRAIQFGAEVVITSHTHQTGTDR
IAEVVAKGSFAPDDVIVNVQGDEPFIRPKLIQQVACSLTKTKAPVSTLCWPISSLQILNNPNVVKVVCTRDNHALYFSRS
AIPFHRDDKNAYSNTFRHIGLYAYRAAFLLEFVSWPPCTLEQIECLEQLRILWSGFSIRVDEACEEPLQDINTKEDLILA
QQYFLDTFNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 1e-35 41
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 6e-36 41
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 8e-36 41