Name : pilB (LPO_1535) Accession : YP_006505501.1 Strain : Legionella pneumophila Lorraine Genome accession: NC_018139 Putative virulence/resistance : Virulence Product : (type IV) pilus assembly protein PilB Function : - COG functional category : - COG ID : - EC number : - Position : 1572102 - 1573826 bp Length : 1725 bp Strand : + Note : - DNA sequence : ATGGCTCTAGCTACAGAAGAATATAGATTACAGGGAATCGGCCAGCTTCTCGTGCTGGAAAAGCTGCTAGATAAAACAAA AGCAATTGAACTACACAAGCTGGCAGCAGCAGAAAAGATGTCTTTGCTGCAATACATTGTAAAAAATAAAATATTATCTG CTGAACAAATTGCACTGACGGCTGCTCAAAATTTTGGCGTACCTATGTTGGATATTAATTGCATCGATGTGGGCACTATT CCTGCCAATCTGGTTAATGAGAAATTAATTAAACGTCATGCCATGGTTCCTCTTTTTAGTCGCGGCACCAATTTATATCT CGCAACAGATGATCCTAGTAAACAAGCTTCATTAAAGGAAATTCAGTTTCACACCGGATTAAATACTCATGCGATAGTTG TAGAAACAGATAAACTTAGTGCCCTGATTGATAATCTGTTAACAGCAAAGGAAAGTCAGGGCTTATCAGAGTATGTTGAA GACTCTGGAGATCTGGAAGGTTTAGAAATAAGTGCTGATGATGAAGATCAAGATATTGATACTGCAACATCAGTAACTGA TGATGCACCTATCGTAAAGTTCGTCAATAAAATTTTATTGGATGCGATAAGGCAAGGAGCTTCTGATATACACTTTGAGC CTTATGAACGAGAATACCGAATCAGGTACAGGCAAGATGGTATTTTACATGAAGTCGCTACCCCTCCCGCAAGCTTGTCA TCTCGTATTACAGCACGTATCAAGGTAATGTCTAATTTGGATATATCAGAACGGCGTATCCCTCAGGATGGTGGCTTCAA AATGAAAATTTCCAAGTCACGGGCAATTGATTTCAGAGTGAGTACATGTCCAACTTCGGCTGGGGAAAAAGTGGTTATGC GGGTTCTTGATTCTGGTACTGCTAAATTAGGTATTGAAGCATTAGGATTTAATCCTGTTCAGCGAACAAATTTCCTGAAA GCAATCCAGCGCCCACAAGGGATGATTTTAGTCACTGGCCCTACTGGTAGCGGTAAAACAGTCACTTTATATACGGCTTT AAATATATTAAATACAATTGAGGTTAATATTTCAACAGCTGAAGATCCAGTTGAAATCAAAGTGCCTGGTATCAATCAGG TTAATATTAATCCTAAAGCTGGCCTAACCTTTTCCGGTGCATTGCGTTCGTTTCTAAGGCAAGATCCTGATATTATCATG GTTGGTGAGATACGAGACCTTGAAACAGCAGAGATTGCTGTAAAAGCTGCTCAGACAGGACATTTGGTTCTTTCTACTCT GCACACAAACAGTGCCGCTGAAACTTTAAATCGTTTAGTAAACATGGGAATACCAACTTTTAACATTGCGAGTTCGGTTA CCTTAATTATTGCGCAAAGGCTGGCAAGAAAATTATGCAATCAATGTAAGGCAGTGCGAGATGACTTTACCAATCAAGGC TTGATTGAACTAGGTTTCAAGGAAGCTGATCTGGTTAATCTTAAATTATACAAAGCAGTTGGTTGCGAGCAATGTACAAG TGGTTATCGCGGGCGAGTCGGGTTGTTTGAGGTTTTACCGATGACGAAAGAGCTTGGTCAATTGATTATGTCAGGTGGTA ATTCGCTGGATATATTAAAGTTAGCTCAATCAGAAGGTATGCTGACTATTTTTCAATCGGGTATAGAAAAAGTTAAGGAA GGAATCACGACCATAGAGGAGGTCAATCGGGTAACCGTTGATTAA Protein sequence : MALATEEYRLQGIGQLLVLEKLLDKTKAIELHKLAAAEKMSLLQYIVKNKILSAEQIALTAAQNFGVPMLDINCIDVGTI PANLVNEKLIKRHAMVPLFSRGTNLYLATDDPSKQASLKEIQFHTGLNTHAIVVETDKLSALIDNLLTAKESQGLSEYVE DSGDLEGLEISADDEDQDIDTATSVTDDAPIVKFVNKILLDAIRQGASDIHFEPYEREYRIRYRQDGILHEVATPPASLS SRITARIKVMSNLDISERRIPQDGGFKMKISKSRAIDFRVSTCPTSAGEKVVMRVLDSGTAKLGIEALGFNPVQRTNFLK AIQRPQGMILVTGPTGSGKTVTLYTALNILNTIEVNISTAEDPVEIKVPGINQVNINPKAGLTFSGALRSFLRQDPDIIM VGEIRDLETAEIAVKAAQTGHLVLSTLHTNSAAETLNRLVNMGIPTFNIASSVTLIIAQRLARKLCNQCKAVRDDFTNQG LIELGFKEADLVNLKLYKAVGCEQCTSGYRGRVGLFEVLPMTKELGQLIMSGGNSLDILKLAQSEGMLTIFQSGIEKVKE GITTIEEVNRVTVD |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-74 | 44 |
gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-74 | 44 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
pilB | YP_006505501.1 | (type IV) pilus assembly protein PilB | VFG1880 | Protein | 0.0 | 100 |
pilB | YP_006505501.1 | (type IV) pilus assembly protein PilB | VFG0112 | Protein | 1e-146 | 55 |
pilB | YP_006505501.1 | (type IV) pilus assembly protein PilB | VFG0233 | Protein | 3e-114 | 52 |
pilB | YP_006505501.1 | (type IV) pilus assembly protein PilB | VFG0182 | Protein | 7e-76 | 45 |
pilB | YP_006505501.1 | (type IV) pilus assembly protein PilB | VFG2048 | Protein | 2e-74 | 44 |