Gene Information

Name : capD (KUI_0424)
Accession : YP_006502118.1
Strain : Taylorella equigenitalis ATCC 35865
Genome accession: NC_018108
Putative virulence/resistance : Virulence
Product : putative capsular polysaccharide biosynthesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 454449 - 456293 bp
Length : 1845 bp
Strand : +
Note : -

DNA sequence : 
ATGGGTCTAAATTTAAGATTACGTTCGTTAGTAATTACAAGTTTCGATATGTTCGCAGTTGTTGTAGCTTGGGTTATGGC
ATATGCTCTGCGTTTTAACTTTGATTATCGAATGATTGAATTGTATGATCCATTTTCATATCTTTTAGTTCTACTTTTAG
TCGTTCATTTCTTTGCTTGTAGGTTTTTGAGGTTGCATAGAGGAATATGGGTATTTGCTACCTTACGCGATATATACAGG
ACTATTCAAGTTGCGGGTATTTCACTTCTTACCCTTCTTTTATACAGGGCACTTGTTTATCACGAATCTTCCTTAATACC
TAGATCAATTTATATTCTGTACCCGCTGTTATTGGTTTGTATTATGGGAGGTGCTAGATTTTTATGGAGAGCTGTAAACG
ATCGCAGAAACTTTTTTGCCCCTCAAAGCAATGCAAAGCCAGTAATTATTTTGGGAGCTGGAGATGCTGGTTTGCTTTTG
ATGCGAGAGCTTGATCGCTCTAATCAATGGAAGGTAGTTGCTTTTCTTGATGATGATCCTAGAAAACATGGTCTTGAAGT
TAACGGAAGAAGAGTTATTGGTAATACCTCAGAACTTGCTAAGCCATTGAGAGATTACGGAGTAAAACATGTCATCATTG
CTATGCCTTATGCGGCAAGGGAGGTTTTGCATAAAGTAACTACTATTGCATTAGCAGAAGGTGCTGGCATATACACAGTG
CCGAATTTAGAGGATTTAATGAGTGGGCGCGTATCCATAAATGCAATGCGTCCTGTAAATATTGAGGATTTGCTAGGACG
TGATACTGTTCAATTGGATACAAATAATATCTCTGAATTAATACAGAATAAAACTATATTGGTAACTGGTGCTGGAGGAT
CTATAGGGAGTGAACTTTGCCGTCAAATTTTTAAATATAATCCGAAAAGCATAGTACTTGTTGAAATTTCTGAATTCGCT
TTATATGAAATCCATCAATGGTTTTCATCTAAGAACACAGCCGTAAGAGTAATCCCTCTCACTGCCGACGTCAAAAATAC
ATCACGCATGAGAGAAATTATTAGTAATTACAAGCCAGACATAATATTTCACGCAGCTGCATATAAACATGTGCCTTTAA
TGGAAGTTTATAACGCATGGGAAGCGGTTCGTAATAATAGTTTTGGTACATATAATGTCGCTAAAATTGCAGTTGAAAAT
GGTGTTAAAAATTTCATTCTGATATCCACCGATAAAGCTGTAAATCCTACAAATGTGATGGGTGCTTCAAAACGCCTTGC
CGAGATGCTGCTTGAGCGTATGCAGACATTTCACGGTGATACTACTACTTTTAATATGGTTCGTTTTGGCAATGTCCTTG
GATCCACTGGAAGTGTTATTCCAAAATTTAAATCTCAAATAGAGAAGGGCGGACCTGTAACTGTAACCCATCCTGAAATT
ACTCGTTACTTTATGTCTATTCCTGAAGCGGCACAGCTTGTTATTCAGGCTGCATCAATGGGTAGAGGCGGTGAAATATT
TGTACTTGATATGGGCGAACCAGTTAAGATTGTGGATTTAGCTAAAAATATGATTAAGTTGTCGGGTTATTCAGAGGATG
AAATTTCAATTGAGTTTACTGGATTGAGACCTGGCGAAAAATTATATGAAGAACTTATGGCTGATGAGGAAAATACATCA
TCCACAACGCACGGAAAATTACGCATTGCCCGCCCTGCACCTACTAAAGAGGGTTTAATTAAGGCTTTTGAACAATGGGT
GTCAGAAAGTGATGTGAGAACTGATGCGGAAGTTCGTACACAATTACAAGTTTGGATACCTGAGTATAAGCCAGCTAATA
ATTAA

Protein sequence : 
MGLNLRLRSLVITSFDMFAVVVAWVMAYALRFNFDYRMIELYDPFSYLLVLLLVVHFFACRFLRLHRGIWVFATLRDIYR
TIQVAGISLLTLLLYRALVYHESSLIPRSIYILYPLLLVCIMGGARFLWRAVNDRRNFFAPQSNAKPVIILGAGDAGLLL
MRELDRSNQWKVVAFLDDDPRKHGLEVNGRRVIGNTSELAKPLRDYGVKHVIIAMPYAAREVLHKVTTIALAEGAGIYTV
PNLEDLMSGRVSINAMRPVNIEDLLGRDTVQLDTNNISELIQNKTILVTGAGGSIGSELCRQIFKYNPKSIVLVEISEFA
LYEIHQWFSSKNTAVRVIPLTADVKNTSRMREIISNYKPDIIFHAAAYKHVPLMEVYNAWEAVRNNSFGTYNVAKIAVEN
GVKNFILISTDKAVNPTNVMGASKRLAEMLLERMQTFHGDTTTFNMVRFGNVLGSTGSVIPKFKSQIEKGGPVTVTHPEI
TRYFMSIPEAAQLVIQAASMGRGGEIFVLDMGEPVKIVDLAKNMIKLSGYSEDEISIEFTGLRPGEKLYEELMADEENTS
STTHGKLRIARPAPTKEGLIKAFEQWVSESDVRTDAEVRTQLQVWIPEYKPANN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 6e-96 47
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 6e-95 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
capD YP_006502118.1 putative capsular polysaccharide biosynthesis protein VFG1300 Protein 1e-92 51
capD YP_006502118.1 putative capsular polysaccharide biosynthesis protein VFG0029 Protein 1e-82 41