Gene Information

Name : A225_R1p0060 (A225_R1p0060)
Accession : YP_006501526.1
Strain :
Genome accession: NC_018107
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 22623 - 24215 bp
Length : 1593 bp
Strand : +
Note : -

DNA sequence :
ATGAATCACGACTATCTCGCCCGTATCGCTGCGCTGGAAGACGCGCTTCGCCAGAAAGACAGTCAGCTCAGTCTCGTTGC
AGAGACTGAGTCGTTCCTGCGTTCTGCACTGGCCCGCGCAGAAGAGAAAATAGAGAACGAAGAGCGCGAGATAGAGCATC
TGCGGGCACAGATAGAAAAACTGCGTCGAATGTTGTTCGGTACCCGCTCCGAAAAACTTCGCCGACAGGTTGAAGAAGCC
GAAGCCCTGCTGAAACAGCAGGAGCAGCAAAGCGATCGCTACAACGGACGGGAAGACGATCCGCAGGTACCTCGCCAGTT
ACGTCAGTCCCGCCATCGTCGCCCGTTACCGGCACACCTTCCCCGCGAGATACATCGGCTGGATCCTGCGGAAACCAGCT
GTCCGGAATGCGGCAGCGGTATGGCGTACCTCAGCGAAGTCAGCGTGGAGCAGCTGGAACTGGTCTCCAGCGCCCTGAAA
GTGATCCGCACGGTCAGGGTGAAAAAGGCCTGCACCCGATGTGACTGTATCGTTGAAGCACCTGCGCCATCACGTCCCAT
CGATCGGGGTATCGCCGGGCCGGGTCTGCTGGCCCGCGTGTTAACGGCCAAATACTGCGAACACCTGCCGCTGTATCGCC
AGTGCGAAATCTTTGCCCGTCAGGGCGTGGATCTGAGCCGGGCTCTGCTCTCCAACTGGGTGGATGCCTGTTGCCGGTTA
ATGGCCCCGCTGGATGAGGCCCTTTACCACTACGTGATGGACTGCCACAAACTGCATACGGATGACACTCCGGTTCCGGT
GCTTGCACCGGGCAGAAAGAAGATGAAAACCGGGCGTATCTGGACGTATGTACGTGACGACAGAAGCGCAGGTTCATCAG
ATCCGCCAGCGGCATGGTTCGCCTTCTCGCCAGACCGGCAGGGAAAACATCCTCAGCAACACCTTCGCCACTATCATGGT
GTGCTGCAGGCGGATGCCTTCGCAGGCTACGATCGGTTGTTCAGTCCGGAACGTGAAGGAGGGCCGCTGACAGAAGCCGC
ATGTTGGGCCCATGCCCGTCGAAAAATCCATGATGTCTATATAAGCACTCACACAGCGACAGCAGAAGAAGCCCTGAAAC
GTATCGGTGAGCTGTACGCGATAGAAGAAGAAATACGCGGCCTCACGACAGAAGAGCGTCTGGCAGCCAGACAATCGCAA
AGTAAACCACTGCTGGCATCGCTGCATGAATGGCTGGTAGAAAAAAATGAGACGCTGTCGAAAAAGTCCCGTCTGGGCGA
AGCGTTCGCTTATGTCCTGAACCAGTGGGATGCGCTGTGCTACTACTGTGAAGATGGCCTGGCAGAGCCTGATAACAACG
CTGCCGAACGAGCCCTTCGTGCCGTCTGTCTTGGGAAAAAGAATTTTATCTTCTTCGGCAGCGACCACGGTGGTGAGCGC
GGAGCCCTGCTGTACGGACTGATCGGGACGTGCAGGCTGAATGGTATCGATCCGGAAGCCTACCTTCGCCATATCCTGAG
CGTACTGCCGGAGTGGCCCAGCAACAAAGTGGCCGAACTGCTGCCATGGAACGTGGTTCTTACCGATAAATAA

Protein sequence :
MNHDYLARIAALEDALRQKDSQLSLVAETESFLRSALARAEEKIENEEREIEHLRAQIEKLRRMLFGTRSEKLRRQVEEA
EALLKQQEQQSDRYNGREDDPQVPRQLRQSRHRRPLPAHLPREIHRLDPAETSCPECGSGMAYLSEVSVEQLELVSSALK
VIRTVRVKKACTRCDCIVEAPAPSRPIDRGIAGPGLLARVLTAKYCEHLPLYRQCEIFARQGVDLSRALLSNWVDACCRL
MAPLDEALYHYVMDCHKLHTDDTPVPVLAPGRKKMKTGRIWTYVRDDRSAGSSDPPAAWFAFSPDRQGKHPQQHLRHYHG
VLQADAFAGYDRLFSPEREGGPLTEAACWAHARRKIHDVYISTHTATAEEALKRIGELYAIEEEIRGLTTEERLAARQSQ
SKPLLASLHEWLVEKNETLSKKSRLGEAFAYVLNQWDALCYYCEDGLAEPDNNAAERALRAVCLGKKNFIFFGSDHGGER
GALLYGLIGTCRLNGIDPEAYLRHILSVLPEWPSNKVAELLPWNVVLTDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 0.0 84
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 0.0 84
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 0.0 84
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 1e-132 75
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 5e-129 69
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 4e-148 65
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 4e-148 65
unnamed AAC31494.1 L0015 Not tested LEE Protein 3e-148 65
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 3e-148 65
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 6e-148 65
unnamed AAL57570.1 unknown Not tested LEE Protein 2e-148 65
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 2e-142 64
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 2e-147 64
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 2e-147 64
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 2e-147 64
tnp AEA34686.1 transposase Not tested Not named Protein 2e-147 64
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 3e-147 64
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 7e-113 55
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 4e-108 52
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 7e-98 50
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 5e-98 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A225_R1p0060 YP_006501526.1 transposase VFG1736 Protein 4e-162 80
A225_R1p0060 YP_006501526.1 transposase VFG1700 Protein 2e-129 69
A225_R1p0060 YP_006501526.1 transposase VFG0793 Protein 2e-148 65