Gene Information

Name : A225_R1p0040 (A225_R1p0040)
Accession : YP_006501522.1
Strain :
Genome accession: NC_018107
Putative virulence/resistance : Virulence
Product : YdaA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 19165 - 19737 bp
Length : 573 bp
Strand : +
Note : -

DNA sequence :
GTGCAATATGCCTACATCAGGGTAAGCTCGGCCGATCAGAATACGGCCCGTCAGGAAGAGGCATTGTCAAAGGCGGGTTT
TCAGCCTGATAAAATTTGTGTTGAGCATGCCAGCGCGAAGGACACAAACCGCCCGGGGTTACAGGAACTCCTGGGGCAAT
TACGCCCTGGTGATACGCTTCTGGTTCATTCCATCGATCGCCTTTGCCGGAATATGTCGGATATGTGCGCTGTCACCACC
CGGCTTCGTGACCAGGGCGTTACCCTTATTTTTCTGAAAGAGCAGCTGACGTTCAGCGCCGGCACAAACAATCCGATGCA
GGAACTGCAGCTGCACATGATGTCGGCATTCAGCCAGTTTGAACGAGCCTTACTGAAGGAAAGGCAGGCCGACGGCATCG
CCGCGAAAAAAGCACGGGGTGAAAAAACAGGGCGCCCCGGCGCCGATATCAAAAAGATCCAGGAAATTGACGCACTCAGA
AGCAGAGGGGTCAGGCTCAGGATCGCCTGCGACCATGCGGGCCTTGGCGTTTCCACATATTATAAGCTTCGTCACCAGAT
GAACAACCAGTAG

Protein sequence :
MQYAYIRVSSADQNTARQEEALSKAGFQPDKICVEHASAKDTNRPGLQELLGQLRPGDTLLVHSIDRLCRNMSDMCAVTT
RLRDQGVTLIFLKEQLTFSAGTNNPMQELQLHMMSAFSQFERALLKERQADGIAAKKARGEKTGRPGADIKKIQEIDALR
SRGVRLRIACDHAGLGVSTYYKLRHQMNNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 2e-25 46
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 2e-25 46
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 2e-25 46
res YP_005124341.1 DNA-invertase Not tested Not named Protein 5e-23 42
res AGK07070.1 resolvase Not tested SGI1 Protein 9e-18 42
res AAK02044.1 resolvase Not tested SGI1 Protein 9e-18 42
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 9e-18 42
res AGF34985.1 resolvase Not tested SGI1 Protein 9e-18 42
res AGF35025.1 resolvase Not tested SGI1 Protein 9e-18 42
res AGF35059.1 resolvase Not tested SGI1 Protein 9e-18 42
res AGK06929.1 resolvase Not tested SGI1 Protein 9e-18 42
res AGK06966.1 resolvase Not tested SGI1 Protein 9e-18 42
res AGK07012.1 resolvase Not tested SGI1 Protein 9e-18 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A225_R1p0040 YP_006501522.1 YdaA VFG1030 Protein 6e-26 46