Gene Information

Name : A225_R1p0230 (A225_R1p0230)
Accession : YP_006501624.1
Strain :
Genome accession: NC_018107
Putative virulence/resistance : Unknown
Product : TnpA transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 160514 - 163492 bp
Length : 2979 bp
Strand : +
Note : -

DNA sequence :
CTGACCATGCCACGCCGCTCAATCCTGTCCGCCACCGAGCGCGAAAGCCTGCTGGCACTGCCAGATGCCAAAGACGAACT
GATACGGCACTACACGTTCAACGAAACCGACCTGTCGGTGATCCGTCAGCGTCGCGGCGCCGCGAATCGATTGGGCTTCG
CTGTGCAGCTTTGCTACTTGCGATTCCCTGGCACCTTTTTGGGCGTCGATGAGCCTCCGTTTCCGCCCCTGTTGCGCATG
GTGGCCGCGCAACTCAAGATGCCAGTGGAAAGTTGGAGCGAGTACGGCCAGCGCGAACAGACACGGCGGGAGCACTTGGT
CGAGCTGCAAACGGTTTTTGGGTTCAAGCCCTTCACCATGAGCCACTATCGGCAAGCCGTGCATACATTGACCGAGCTGG
CCTTGCAGACCGACAAAGGCATCGTGCTGGCGAGCGCACTTGTCGAGAATCTGCGGCGGCAGAGCATTATCCTGCCCGCC
ATGAATGCCATCGAGCGCGCAAGCGCCGAGGCCATCACCCGTGCCAACCGACGCATTTACGCGGCGCTGACCGATTCTTT
GTTATCACCCCACCGTCAGCGCCTGGACGAACTTCTCAAGCGCAAGGACGGCAGTAAAGTGACGTGGCTGGCATGGCTGC
GCCAGTCGCCTGCCAAACCGAACTCTCGCCACATGCTCGAACATATTGAGCGCCTGAAATCCTGGCAAGCACTTGATCTG
CCCGCAGGCATCGAGCGGCAGGTTCACCAGAACCGCCTGCTCAAAATCGCTCGTGAAGGTGGCCAGATGACGCCTGCTGA
TCTGGCAAAGTTCGAGGTGCAACGACGCTATGCCACGCTGGTAGCGCTGGCCATCGAAGGCATGGCCACCGTCACCGATG
AAATCATCGACCTTCACGATCGCATCATCGGCAAGCTGTTCAACGCGGCCAAGAACAAGCATCAGCAGCAGTTCCAGGCT
TCCGGCAAGGCGATCAACGACAAGGTGCGGATGTATGGGCGCATCGGTCAAGCGTTGATTGAGGCCAAGCAAAGCGGCAG
CGATCCGTTCGCCGCCATCGAGGCCGTTATGCCCTGGGACACCTTCGCCGCCAGCGTCACCGAAGCGCAAACATTGGCGC
GGCCTGCCGACTTTGATTTCCTGCACCACATCGGTGAAAGCTATGCCACGCTACGCCGCTACGCGCCGCAGTTCCTGGGC
GTGCTCAAATTGCGGGCTGCGCCCGCCGCCAAGGGTGTGCTCGATGCCATCGACATGCTGCGCGGCATGAACAGCGACAG
CGCGCGCAAGGTGCCCGCCGATGCGCCAACCGCATTCATCAAGCCGCGCTGGGCAAAGCTGGTTCTGACCGACGACGGCA
TCGACCGGCGTTACTACGAGTTATGCGCCCTGTCGGAGCTGAAGAACGCGCTGCGCTCCGGTGATGTCTGGGTGCAGGGT
TCTCGCCAGTTCAAGGACTTCGACGAATACCTGGTGCCGGTCGAGAAGTTCGCCACTTTGAAGCTGGCCAGCGAATTGCC
GCTGGCAGTGGCCACCGACTGCGACCAATACCTGCATGACCGGTTGGAATTGTTGGAGGCGCAACTCGCCACAGTCAACC
GCATGGCTGCGGCCAACGACTTACCGGATGCCATCATCACCACCGCGTCAGGCCTGAAGATCACGCCGCTGGACGCGGCA
GTACCAGACGCCGCGCAAGCCATGATCGACCAGACAGCTATGCTGCTGCCGCACCTCAAAATCACCGAGTTGCTGATGGA
GGTCGATGAATGGACGGGCTTCACCCGCCACTTCACACACCTGAAGACCAGCGACACGGCCAAGGACAAAACCTTGCTGT
TGACGACGATCCTGGCCGACGCGATCAACCTGGGTCTGACCAAAATGGCCGAGTCCTGCCCTGGCACCACCTACGCCAAG
CTGTCTTGGCTGCAAGCCTGGCACATCCGCGATGAAACCTATTCGACGGCGCTGGCCGAGCTGGTGAATGCGCAGTTTCG
GCAACCCTTCGCCGGCAACTGGGGTGACGGCACCACGTCATCGTCGGACGGCCAGAACTTCAGAACCGGCAGCAAAGCAG
AAAGCACTGGTCATATCAACCCGAAGTATGGAAGCAGTCCAGGACGGACTTTCTACACCCATATCTCCGACCAGTACGCG
CCCTTCAGTGCCAAGGTGGTCAACGTGGGCATTCGTGATTCAACTTACGTGCTTGATGGCCTGCTGTACCACGAGTCGGA
CTTGCGCATCGAGGAACACTACACCGACACGGCAGGCTTCACCGATCACGTGTTTGGCTTGATGCATTTGCTGGGATTTC
GCTTCGCGCCGCGTATCCGTGACTTGGGCGAAACCAAGCTATTCATCCCCAAGGGCGATGCCGCCTATGACGCGCTCAAG
CCGATGATTAGCAGCGACAGGCTGAACATCAAGCAAATACGCGCCCATTGGGATGAAATTCTGCGGCTGGCCACCTCCAT
CAAGCAAGGCACGGTAACGGCTTCGCTGATGCTGCGCAAACTCGGCAGCTACCCGCGCCAGAACGGCTTGGCCGTGGCGT
TGCGCGAGCTGGGGCGCATCGAGCGCACGCTGTTCATTTTGGATTGGCTGCAAAGCGTGGAGCTGCGCCGCCGCGTCCAT
GCGGGGCTGAATAAGGGCGAGGCGCGCAACGCGCTGGCCAGGGCGGTCTTCTTCTACCGATTGGGTGAAATCCGCGACCG
CAGTTTTGAGCAGCAGCGCTACCGGGCCAGCGGCCTCAATCTGGTGACGGCGGCCATCGTGTTGTGGAACACGGTATATC
TGGAGCGTGCCACCAGTGCTTTGCGTGGCAACGGCACGGCGCTGGACGACACATTGTTGCAATATCTGTCGCCGCTGGGG
TGGGAGCACATCAACCTGACCGGCGATTACCTATGGCGCAGCAGCGCCAAGGTCGGTGCGGGGAAGTTTAGGCCATTGCG
ACCGCTGCCACCGGCTTAG

Protein sequence :
MTMPRRSILSATERESLLALPDAKDELIRHYTFNETDLSVIRQRRGAANRLGFAVQLCYLRFPGTFLGVDEPPFPPLLRM
VAAQLKMPVESWSEYGQREQTRREHLVELQTVFGFKPFTMSHYRQAVHTLTELALQTDKGIVLASALVENLRRQSIILPA
MNAIERASAEAITRANRRIYAALTDSLLSPHRQRLDELLKRKDGSKVTWLAWLRQSPAKPNSRHMLEHIERLKSWQALDL
PAGIERQVHQNRLLKIAREGGQMTPADLAKFEVQRRYATLVALAIEGMATVTDEIIDLHDRIIGKLFNAAKNKHQQQFQA
SGKAINDKVRMYGRIGQALIEAKQSGSDPFAAIEAVMPWDTFAASVTEAQTLARPADFDFLHHIGESYATLRRYAPQFLG
VLKLRAAPAAKGVLDAIDMLRGMNSDSARKVPADAPTAFIKPRWAKLVLTDDGIDRRYYELCALSELKNALRSGDVWVQG
SRQFKDFDEYLVPVEKFATLKLASELPLAVATDCDQYLHDRLELLEAQLATVNRMAAANDLPDAIITTASGLKITPLDAA
VPDAAQAMIDQTAMLLPHLKITELLMEVDEWTGFTRHFTHLKTSDTAKDKTLLLTTILADAINLGLTKMAESCPGTTYAK
LSWLQAWHIRDETYSTALAELVNAQFRQPFAGNWGDGTTSSSDGQNFRTGSKAESTGHINPKYGSSPGRTFYTHISDQYA
PFSAKVVNVGIRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFGLMHLLGFRFAPRIRDLGETKLFIPKGDAAYDALK
PMISSDRLNIKQIRAHWDEILRLATSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQSVELRRRVH
AGLNKGEARNALARAVFFYRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERATSALRGNGTALDDTLLQYLSPLG
WEHINLTGDYLWRSSAKVGAGKFRPLRPLPPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA ACF06153.1 transposase Not tested Tn5036-like Protein 0.0 100
EC042_4089 YP_006098372.1 transposase Not tested Tn2411 Protein 0.0 89
tnpA AAL08440.1 transposase TnpA Not tested SRL Protein 0.0 87
EXA24 ABD94633.1 truncated Tn1721 tranposase Not tested ExoU island A Protein 0.0 73
tnpA ACY75538.1 TnpA Not tested Tn6060 Protein 0.0 73

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A225_R1p0230 YP_006501624.1 TnpA transposase VFG1031 Protein 0.0 87