Gene Information

Name : A225_R1p0225 (A225_R1p0225)
Accession : YP_006501623.1
Strain :
Genome accession: NC_018107
Putative virulence/resistance : Virulence
Product : TnpR recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 159900 - 160517 bp
Length : 618 bp
Strand : +
Note : -

DNA sequence :
TTGACATATTCCGTCAAAGGTAATAGATTTCATCCTGACACTTTTGCCTTTGGAGGCATCTTGCAAGGTCAACGCATCGG
CTATGTCCGCGTCAGCAGCTTCGACCAGAACCCGGAACGGCAATTGGAGGGTGTTCAGGTGGCGCGGGTGTTCACCGACA
AGGCTTCTGGCAAGGACACCCAGCGTCCCGAGCTGGAAAGGCTGCTGGCCTTCGTCCGCGAGGGCGACACCGTGGTGGTG
CATAGCATGGACAGGCTGGCACGCAACCTTGATGACCTGCGCCGCATCGTCCAAGGGCTGACACAACGGGGCGTGCGCAT
GGAGTTCGTCAAAGAAGGGCTGAAGTTCACCGGCGAGGACTCACCGATGGCCAATCTGATGCTGTCGGTCATGGGAGCCT
TCGCTGAGTTCGAGCGCGCCCTGATCCGCGAACGTCAGCGCGAGGGAATCGTGCTGGCCAAGCAGCGCGGTGCCTACCGG
GGACGAAAGAAATCGCTGAACAGCGAACAAATTGCCGAGTTGAAACGGCGAGTTGCGGCAGGCGACCAAAAAACCTTGGT
GGCCCGTGACTTCGGCATCAGCCGCGAAACCTTGTACCAGTACCTGCGGGAAGACTGA

Protein sequence :
MTYSVKGNRFHPDTFAFGGILQGQRIGYVRVSSFDQNPERQLEGVQVARVFTDKASGKDTQRPELERLLAFVREGDTVVV
HSMDRLARNLDDLRRIVQGLTQRGVRMEFVKEGLKFTGEDSPMANLMLSVMGAFAEFERALIRERQREGIVLAKQRGAYR
GRKKSLNSEQIAELKRRVAAGDQKTLVARDFGISRETLYQYLRED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 1e-85 100
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 4e-66 84
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 5e-64 83
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 5e-64 83
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 7e-64 83
res YP_005124341.1 DNA-invertase Not tested Not named Protein 8e-24 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A225_R1p0225 YP_006501623.1 TnpR recombinase VFG1030 Protein 2e-64 83