Gene Information

Name : A225_0909 (A225_0909)
Accession : YP_006496670.1
Strain : Klebsiella oxytoca E718
Genome accession: NC_018106
Putative virulence/resistance : Virulence
Product : type IV fimbrial assembly
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 966607 - 967992 bp
Length : 1386 bp
Strand : -
Note : ATPase PilB

DNA sequence : 
ATGAAAACTGAACAATTGATACCTCTTTGCCAGCGCTATCAGGCCTTACTGCTCGATAGTAATGAACACACCATCGCTAT
CGCCGTGGTTGACGCCCCCGCCCCGGAGCTGCTGGAAGCGTTACGTTTCGCGACGCAGAAAAGGATTGATATCGAGTGCT
GGAGCCAGGACCAGATGGACAAGCGGCTGCAGACGCCGGGAATATCAACCCTCACCCCGCCTGTTGAAGCCTCGGCCAGC
ATCGTTGAACAGGTAAATAGCCTTCTGGAACAGGCCCTGCGCCAGCGCGCATCGGATATTCATATTGAACCCGGTGACGA
TCGCCTGAGAATTCGCCTGCGGGTAGATGGCGTACTCCATTCTCTTGCGCCGCTTGCGCCGGAACTCGCCGCCCCCATCA
CCGCCCGACTTAAAGTGCTCAGCAATCTGGATATCGCTGAACACCGGGTACCGCAGGACGGTCAGTTTACCCTCACGCTC
GCAGACCGCCCGATCTCGTTTCGGATCGCCACGCTTCCCTGCCGCGGCGGGGAAAAAATCGTCCTTCGCTTATTACATCA
GGTCGAACAAGCGCTGGACCTCGAAGCGCTGGGGCTATCGTCTCAGCAGCTTGCCGTCTTTCGCGCGGCGCTTAACCAAC
CTCAGGGGCTGATGCTGGTCACCGGCCCGACGGGAAGTGGGAAAACCGTCACTTTGTACAGCGCGCTGCAGGCGCGGAAT
CGCGACGAGGTCAATATATGCAGCGTTGAAGATCCGCTGGAGATCCCCATCGTGGGGATGAATCAGACGCAGATTAATCC
GCGGGCGGGCTTAACCTTTCACAGCGTACTGCGCGCCCTGCTACGCCAGGATCCTGATATCGTGATGGTCGGGGAGATAC
GCGATGCAGAAACCGCTGAAATTGCGATAAAAGCAGCGCAAACCGGGCACCTGGTTCTCTCAACGCTGCACACCAATTCA
ACCAGTGAAACGCTGGTTCGCCTGCAGCAGATGGGCGTTGCGCGCTGGATGATCTCATCCGCGCTTTCTCTGGTGGTTGC
TCAACGCCTGGTACGCAAACTGTGCCCGCACTGCCGCCAGGAAACCGGCAGTTCGGCCGATGTTCCACACAGCCTGTGGC
CGCGGGCGCTTCCTCGCTGGCAGGCTCCGGGCTGTCAGCACTGCTATCACGGCTACTACGGTCGCCTGGCGCTATTTGAG
CTGCTCCCCGTCACCACCGCGTTACGGCAGGCGATTACTCAGGGTCTTAGCGCCGGAGAGATCGAGTCCCTGGCGCGCGA
ATCCGGTATGATGACGCTGTTTGAGAGCGGCTGTCTGGCCGTCGAACGTGGGATGACAAGTCTGGAAGAGGTCGTTCGCG
TGTTGGGGATACCGCATGGCGACTAA

Protein sequence : 
MKTEQLIPLCQRYQALLLDSNEHTIAIAVVDAPAPELLEALRFATQKRIDIECWSQDQMDKRLQTPGISTLTPPVEASAS
IVEQVNSLLEQALRQRASDIHIEPGDDRLRIRLRVDGVLHSLAPLAPELAAPITARLKVLSNLDIAEHRVPQDGQFTLTL
ADRPISFRIATLPCRGGEKIVLRLLHQVEQALDLEALGLSSQQLAVFRAALNQPQGLMLVTGPTGSGKTVTLYSALQARN
RDEVNICSVEDPLEIPIVGMNQTQINPRAGLTFHSVLRALLRQDPDIVMVGEIRDAETAEIAIKAAQTGHLVLSTLHTNS
TSETLVRLQQMGVARWMISSALSLVVAQRLVRKLCPHCRQETGSSADVPHSLWPRALPRWQAPGCQHCYHGYYGRLALFE
LLPVTTALRQAITQGLSAGEIESLARESGMMTLFESGCLAVERGMTSLEEVVRVLGIPHGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 4e-73 48
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-73 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A225_0909 YP_006496670.1 type IV fimbrial assembly VFG2048 Protein 2e-75 49
A225_0909 YP_006496670.1 type IV fimbrial assembly VFG2426 Protein 5e-71 46
A225_0909 YP_006496670.1 type IV fimbrial assembly VFG0182 Protein 6e-70 45
A225_0909 YP_006496670.1 type IV fimbrial assembly VFG1876 Protein 2e-71 44