Gene Information

Name : A225_0572 (A225_0572)
Accession : YP_006496344.1
Strain : Klebsiella oxytoca E718
Genome accession: NC_018106
Putative virulence/resistance : Virulence
Product : Retron-type reverse transcriptase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 601577 - 603100 bp
Length : 1524 bp
Strand : +
Note : -

DNA sequence :
TTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCAACTGATCCGTCCCGACGGATTGAACGGCTGCTGCG
TCTGATAACACAACAAGAATGGCTGGCTGAAGCGGCGCGGATCACACTTTCATCAAAGGGGGCTCATACCCCCGGCGTTG
ACGGTGTGAACAAAACAAAGCTACAGGCCGGACTGACTGCTGAGCTGCAAAGGCTCAGCCAAGAACTTCTCTCGGGTCAC
TACCAACCTATGCCAGCCAGACGGGTTTATATCCCTAAAAGCAACGGCAAACTGCGGCCTCTGGGCATCCCCACGTTGCG
GGATCGTATTGTTCAGCGGGCCATGCTGATGGCAATGGAGCCCATCTGGGAGAGTGATTTTCATACGCTCTCGTATGGCT
TTCGGCCTGAACGCAGTGTCCATCATGCGATCCGCACGGTGAAGTTACAGCTCACAGACTGCGGTGAAACACGGGGGCGC
TGGGTTATTGAAGGTGACCTATCCAGCTACTTCGACACCGTACATCATCGACTGCTGATGAAAGCCGTCCGCCGCAGGGT
CAGTGACGCCCGCTTTATGAGCCTGTTGTGGAAAACCATCAAGGCCGGGCATGTTGATGCCGGTCTCTTTCGGGCGGCCA
GCGAAGGCGTGCCGCAGGGTGGTGTGATCTCGCCATTGCTGTCGAACATCATGCTCAATGAGTTCGATCAGTATCTGCAT
GCATGCTACCTGAGCGGAAAAGCCCGAAAGGATCGCTGGTACTGGAATCACAGCATCCAGCAGGGCCGAAGTACTGCGGT
CAGAGAAAACTGGCAATGGAAGCCTGCTGTGGCGTATTGCCGGTATGCCGATGACTTCGTACTTATTGTCAAAGGCACCA
AAGCACAGGCGGAAGCCATCAGGGAGGAGTGCCGGGGCGTGCTCGAAGACAGTCTGAAGCTCAGGCTGAACATGGACAAG
ACCAGAATCACCCATGTAAACGACGGTTTTATCTTTCTGGGTCACAGGATCATCCGCAAACGCAGCCGTTACGGTGATAT
GCGGGTGGTCTCGACGATCCCGAAGGAGAAAGCCAGAAACTTTGCGGCATCGCTGACGGCACAGTTATCAGGCAACTACA
GTGAAAGCAAAATCGATATGGTTGAGATGCTCAACCGGAAGCTGAAAGGCTGGGCGGCGTTCTATCAGTTCGTTGATTTT
AAGGCCAGAGTGTTCAGTTATATCGATCGTGTCGTGTTCTGGAAGCTGGCTCACTGGCTGGCGCGTAAATACCGTGCTGG
TATCGCATCCCTGATGAGGTGGTGGTGTAAATCACCGAAACCGGGTCAGAGCAAAACGTGGGTTTTATTTGGTAAAACCA
ATCATGGCAAGCTCAGCGGTGAAGTACTGTACCGGTTGGTGGGGCAAGGCAAGAAGCTGTTCCGCTGGCGTCTGCCTGAG
GGAAATCCCTATCTGAGGACGGAAGCCAGAAACACATATACATCGCGTTTTACTGAAGTGGCAATGGCGTTCACCAGCGT
TTAA

Protein sequence :
MIISEMQRKLATWAATDPSRRIERLLRLITQQEWLAEAARITLSSKGAHTPGVDGVNKTKLQAGLTAELQRLSQELLSGH
YQPMPARRVYIPKSNGKLRPLGIPTLRDRIVQRAMLMAMEPIWESDFHTLSYGFRPERSVHHAIRTVKLQLTDCGETRGR
WVIEGDLSSYFDTVHHRLLMKAVRRRVSDARFMSLLWKTIKAGHVDAGLFRAASEGVPQGGVISPLLSNIMLNEFDQYLH
ACYLSGKARKDRWYWNHSIQQGRSTAVRENWQWKPAVAYCRYADDFVLIVKGTKAQAEAIREECRGVLEDSLKLRLNMDK
TRITHVNDGFIFLGHRIIRKRSRYGDMRVVSTIPKEKARNFAASLTAQLSGNYSESKIDMVEMLNRKLKGWAAFYQFVDF
KARVFSYIDRVVFWKLAHWLARKYRAGIASLMRWWCKSPKPGQSKTWVLFGKTNHGKLSGEVLYRLVGQGKKLFRWRLPE
GNPYLRTEARNTYTSRFTEVAMAFTSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SF2976 NP_708749.1 reverse transcriptase-like protein Not tested SHI-1 Protein 0.0 94
sfiA AAB86996.1 reverse transcriptase-like protein Not tested SHI-1 Protein 0.0 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A225_0572 YP_006496344.1 Retron-type reverse transcriptase VFG0639 Protein 0.0 94