Gene Information

Name : A225_4904 (A225_4904)
Accession : YP_006500577.1
Strain : Klebsiella oxytoca E718
Genome accession: NC_018106
Putative virulence/resistance : Unknown
Product : phage integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5146331 - 5147500 bp
Length : 1170 bp
Strand : -
Note : Phage P4-associated

DNA sequence :
ATGAAGCTGACTGCTCGTCAGGTTGAAACTGCGAAACCCAAAGAGAAGCCCTACAAACTCGCTGATGGTGGAGGTCTTTA
CCTGCTGGTTAATCCCAACGGCAAAAGATACTGGCGTCTCAAATACCGTTCACTAGGTAAAGAGAAGCTGCTCGCTATTG
GCGTTTACCCCGATGTTTCTTTAGCTGAAGCCAGAAGCAAGCGAGAGGATGCTAAAAGGACATTAGCGGCTGGCAACGAT
CCTTCTCTTGAACGGAAAATTGAGAAACTTAGTCGTCAACAAGACGCTGAAAACTCGTTTGAGGCTCTCACGCGGGAGTG
GTATCAGCGTCGCTATGACCGCTGGTCTGTGTCCTATCGTGAAGAGATGATGAGAACCTTTGAGAAAGATGTATTTCCTT
ATATCGGTCACCGGCCAATCAAAGATATCAAGCCGATGGAGTTGCTTGCAGTTCTTTCAAAGATAGAAGCACGAGGGGCA
ACAGAGAAAGTCCGCAAGGTTCGTCAGCGTTGTGGAGAGGTCTGGAAGTATGCCGTTGTGACTGGGAGGGCTGAGTACAA
TCCAGCTCCTGATCTAGCCAGCGCCGTGACTCCTCATGAGAAAGAGCATTATGCATTTTTAACCCAGGATGAATTGCCTG
AGTTTCTTCAAACTCTGAACACCTATGCCGGTAGTGTGCTTGTTAAGATTGCGATGCAATTGCTTATTTTAACGGGAGTA
AGGCCTGGGGAGTTGAGGCAAGCGGAGTGGCAGGAGTTTGATTTTGAGAAAAAGGTTTGGAATGTACCAGCGGAACGCAT
GAAAATGCGCCGCCCTCATCTGGTCCCATTATCAAGCCAGGCAATTGACCTGCTTAATCAGCTTAAGCCCATGACGGGAG
CAGGAGCGTTGTTGTTCCCTGGACGTAATGATCCTAAGAAACCGATGAGTGATATGGCATTGACTGTGTTGGTCAGGCGT
ATCGGCTATGCCGGGCGCGTTACAGGGCATGGATTCCGCCACACGATGAGTACCATTTTGCATGAGCAGGGATTTGATTC
GGCCTGGATCGAGCTACAGCTGGCTCATGTTGATAAGAACTCAATTCGTGGAACGTATAACCACGCTCAATACCTGGAAG
GGAGAAGGGAAATGATGCAGTGGTATAGTGATTATTTAAAACTGTTATGA

Protein sequence :
MKLTARQVETAKPKEKPYKLADGGGLYLLVNPNGKRYWRLKYRSLGKEKLLAIGVYPDVSLAEARSKREDAKRTLAAGND
PSLERKIEKLSRQQDAENSFEALTREWYQRRYDRWSVSYREEMMRTFEKDVFPYIGHRPIKDIKPMELLAVLSKIEARGA
TEKVRKVRQRCGEVWKYAVVTGRAEYNPAPDLASAVTPHEKEHYAFLTQDELPEFLQTLNTYAGSVLVKIAMQLLILTGV
RPGELRQAEWQEFDFEKKVWNVPAERMKMRRPHLVPLSSQAIDLLNQLKPMTGAGALLFPGRNDPKKPMSDMALTVLVRR
IGYAGRVTGHGFRHTMSTILHEQGFDSAWIELQLAHVDKNSIRGTYNHAQYLEGRREMMQWYSDYLKLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 2e-131 65
ECs4534 NP_312561.1 integrase Not tested LEE Protein 2e-131 65
int AAC31482.1 CP4-like integrase Not tested LEE Protein 2e-131 65
int ACU09430.1 integrase Not tested LEE Protein 2e-131 65
int CAC39282.1 integrase Not tested LPA Protein 1e-131 65
aec33 AAW51716.1 Int Not tested AGI-3 Protein 4e-132 65
int AAD44730.1 Int Not tested SHI-2 Protein 6e-130 64
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 5e-130 64
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 7e-130 64
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 7e-130 64
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 1e-124 63
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 5e-119 59
STY4821 NP_458899.1 integrase Not tested SPI-10 Protein 1e-77 44
SESS1296_03598 AFO66301.1 bacteriophage integrase Not tested SESS LEE Protein 1e-76 43
SESS1635_03816 AFO66367.1 bacteriophage integrase Not tested SESS LEE Protein 1e-76 43
ECO111_3718 YP_003236059.1 putative integrase Not tested LEE Protein 5e-74 41
c5216 NP_757064.1 prophage P4 integrase Not tested PAI II CFT073 Protein 4e-76 41
APECO1_3534 YP_854214.1 P4-like integrase Not tested PAI I APEC-O1 Protein 2e-76 41
ORF_1 AAZ04412.1 phage integrase Not tested PAI I APEC-O1 Protein 1e-76 41
int ADD91747.1 P4 integrase Not tested PAI-I AL862 Protein 8e-77 41
int AAL51003.1 CP4-like integrase Not tested LEE Protein 4e-76 41
c3556 NP_755431.1 prophage P4 integrase Not tested PAI I CFT073 Protein 3e-76 41
int AAT48697.1 CP4-like integrase Not tested PAI I 4787 Protein 3e-76 41
int AAK16198.1 Int Not tested PAI-I AL862 Protein 8e-77 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A225_4904 YP_006500577.1 phage integrase VFG0783 Protein 1e-131 65
A225_4904 YP_006500577.1 phage integrase VFG0598 Protein 3e-130 64
A225_4904 YP_006500577.1 phage integrase VFG1693 Protein 1e-76 41