Gene Information

Name : A225_4606 (A225_4606)
Accession : YP_006500282.1
Strain : Klebsiella oxytoca E718
Genome accession: NC_018106
Putative virulence/resistance : Virulence
Product : manganese ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4840954 - 4841871 bp
Length : 918 bp
Strand : +
Note : periplasmic-binding protein SitA

DNA sequence : 
ATGCTGCACCTGCCCCCCCTGAAGCATCTGATGTTTGCCGCCACGCTGGCGCTGCTGGCCGTCGCCCCCGTCCAGGCAAA
AGAGAAATTTAAAGTGATTACCACCTTCACGGTGATCGCCGATATGGCGCAAAACGTCGCGGGCGACGCCGCCGACGTCA
GCTCCATCACCAAACCGGGGGCCGAGATCCATGAATATCAGCCGACCCCCGGGGATATCAAACGCGCGCAGGGCGCGCAG
CTGATCCTCGCCAACGGCCTGAACCTTGAACTGTGGTTCGCCCGCTTTTATCAGCACTTAAACGGCGTACCGGAAGTGGT
GGTCAGCAACGGCATTCAGCCGATGGGCATCAGCGAAGGGCCGTATAACGGCAAACCTAACCCGCACGCGTGGATGTCGG
CGGACAATGCGCTGATCTACGTCGATAATATTCGCGACGCGCTGGTGAAATACGATCCTGCGAACGCCGATGCCTATCGC
CACAACGCCGAAGCCTACAAAGAGAAGATCCGCCAGACCATGGCGCCGCTGAAGGCGGAACTGGCGAAGCTGCCGCAGGA
TAAGCGCTGGCTGGTGACCAGCGAGGGCGCGTTCTCCTATCTGGCCCGCGATAACGGCCTCCAGGAGCGCTATCTGTGGC
CGATAAACGCCGACCAGCAGGGCACCCCGCAGCAGGTGCGCAAAACCATCGACACCATGAAGAAAGAGCGGATCCCGACT
ATCTTTAGCGAAAGCACCATCTCTGATAAACCGGCGCGTCAGGTGGCCCGGGAGGCCGGCGCCCACTACGGCGGCGTCCT
GTACGTCGACTCTCTGAGCGCCGCCGATGGCCCGGTGCCGACCTATCTCGACCTGCTGCGCGTCACCACCCAAACCATCG
TCCAGGGCATCAACGACGGACTAAGGAAACAGGCATGA

Protein sequence : 
MLHLPPLKHLMFAATLALLAVAPVQAKEKFKVITTFTVIADMAQNVAGDAADVSSITKPGAEIHEYQPTPGDIKRAQGAQ
LILANGLNLELWFARFYQHLNGVPEVVVSNGIQPMGISEGPYNGKPNPHAWMSADNALIYVDNIRDALVKYDPANADAYR
HNAEAYKEKIRQTMAPLKAELAKLPQDKRWLVTSEGAFSYLARDNGLQERYLWPINADQQGTPQQVRKTIDTMKKERIPT
IFSESTISDKPARQVAREAGAHYGGVLYVDSLSAADGPVPTYLDLLRVTTQTIVQGINDGLRKQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-117 83
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-117 83
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 3e-117 83
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 3e-117 83
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 3e-117 83

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A225_4606 YP_006500282.1 manganese ABC transporter BAC0349 Protein 2e-117 83
A225_4606 YP_006500282.1 manganese ABC transporter BAC0439 Protein 1e-88 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A225_4606 YP_006500282.1 manganese ABC transporter VFG0525 Protein 1e-117 83