Gene Information

Name : A225_4514 (A225_4514)
Accession : YP_006500195.1
Strain : Klebsiella oxytoca E718
Genome accession: NC_018106
Putative virulence/resistance : Virulence
Product : type 1 fimbriae anchoring protein FimD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4752987 - 4755377 bp
Length : 2391 bp
Strand : -
Note : -

DNA sequence :
GTGAAAAATAACACTTCGGATATGACTTCCGTTTATTCGGCGATCGCGGCGCCAACCGGCGGGATTTTATTATTGCCGAC
GGCGCTTTTTCTGCTGTACCAAAGCGGTATCGCGCGGGCGGAGGACTACTTTGATCCGGCGGCATTAGAATTTGCCAATC
CGCAGCAAAAGACCGCTGATTTACACTATTTTGCTAAAGCAGGCGGCCAGCAGCCCGGGACATACCCGGTCAGCATTTGG
GTGAATAACCAGGAGATAGCCCAGGGCGAGGTGACATTTGTCGACAGCAACGGCGAACTGCGGCCGCAGTTAACCCCGGC
GCAGCTGGCGGAATATGGCGTCAACGTCAGCGCTTTCCCGGCGTTTAATACCCTGCATGAGGGAGAAACGTTTACTCGCA
TCGAGCGCTACATCCCCGATGCCAGCAGCCGTTTTGATTTCGCCACTCAGCGTCTGAACTTAAGTATTCCCCAGGCGGCC
ATGAACGCCCAAAGCCGCGGATACGTGGATCCGGCGCGCTGGGATGATGGTATCCCGGCGGCGTTTGTTAACTATAACCT
GACCGGGTCGCAAACCCGGCAGACGGATGACAGCAGCCGCTCCAGCTACCTGAATCTACGCAGCGGGGTTAACCTCGGCG
CCTGGCGCCTTCGTAACGTCTCGTCGATGGAGTATGACCGGACCCGGCGCTGGAATTCACAGAGTACCTGGCTACAGCGC
GACCTGAAGTCACTCAAAAGCCTGCTGCGGATGGGCGATACCTTTACGACCGGCGACGTTTTCGACAGCGTGCAGTTTCG
CGGCGTTCAGCTGATGTCCGATGATGAAATGCTGCCGGATAGCCAGCGTGGCTTCGCCCCGACGATCCGCGGAATGGCGC
ACAGCAACGCCAAAGTCACCATCTCCCAGCATGGCTACGTTATCTATGAAACGTTCGTCTCGCCGGGGGCGTTTGCGATA
AACGACCTCTATCCAACGGCGCAAAGCGGCGATCTCGAGGTGCAGGTAAAAGAGAGCGATGGTTCGGTGCGGACCTTTAC
CCAGCCTTTTTCAGCCGTCCCGTTTATGCTGCGGGAAGGACGCGTGAAATTCAGCCTGAGCGCCGGACGCTACCATTCGG
AGCAGAGCCAGGCGCGTTCGCCGACGTTTTTGCAGGGTACGCTCTTTTATGGGCTACCGGCTGAATTCACGCTCTACGGC
GGTAGCCAGCTGGCGCAGGATTACCAGTCGTGGGCGCTCGGCGTCGGGCGCGGTTTTGGCGAGCTCGGATCGCTTGGAGG
CGATGCGACATGGGCGAACACCACGACGCCGTCGGGAAAGCGCTCGGCCGGCCATTCGGTACGGGTGCAGTACCAGAAGG
ATTTTGCCGGCACCGGCACCTCATTTAGCCTCGCCAGCTATCGCTACTCCTCCGGCGGTTATTACGACTTCAGCGAAGCC
AGCGCGCTTGAGAGCCGCAATGGTCTGCTGGATAACAAGCGCAGCCGCGAAGAGGTCTCCCTTTCTCAGGCATTTGGCGG
TATGAGCAGCCTGGCGATTTCCGCCTGGTCGCAGGAGTACTGGCACCGCCAGAGCCGCGATGAAACGATCCATCTCGGTT
TTTACAGCGCCTGGCGAGGCGTTTCGTGGGGCGTGGGTTATTACTACACCCAGTCATCCGATCGCCAAAAAGACGATCGC
TCGTGGTCCTTGAACCTGAGCATTCCGCTTGGCGGCCCGCTGTCCGAGAGCGCGGTTAGCTACAGCACTACCTCCGACAG
TAACGGACGCACCTCGCAGCAGGCGTCGCTGTACGGTTCGCTTCCGCGCAATCCCAATCTCTACTACTCCCTTCAGCAGG
GCTACGTTAACGGCGGCCAGGGCAGCAACAGCAGCGCATCGCTCGATTACCACGGCGGCTATGGAACCGCGCAGCTCGGC
TATCGCCGCGATAGCGCAAGCCATCAGCTGACCTGGGGCGCATCGGGGTCCATCGTCGCCCATCCTCATGGCGTGACGCT
GGGTCAGACCGTCGGCGAAAGCTTTGCCATCGTACGCGCTCCGGGAGCCGCCGACGTGGCGATTCAGAACGGCAGCAACG
TGCATACCGACTGGCGGGGCTATGCGGTGGTGCCCTCGCTGACGGCGTATCGCAAAAACACCATTACGCTCGATACCGAA
TCGCTGGCCGACGATGCCGATGTTGAACTTGAAGGGCAGACGGTGATCCCCGGCGGCGGGGCGGTGGTGCAGGCAAACTA
TCAGACCCACATCGGCAGCCGCGTGCTGTTTACCCTCAGCGATAGCCACGGCCCGCTGCCGTTCGGCGCCAGCGTTCGCT
TGCGTAAAGCAAAAGCGATCGGGGCGCGGCGCCGGGCGGCATGGTGGCGGATGGCGGGCAGGTCTATCTGA

Protein sequence :
MKNNTSDMTSVYSAIAAPTGGILLLPTALFLLYQSGIARAEDYFDPAALEFANPQQKTADLHYFAKAGGQQPGTYPVSIW
VNNQEIAQGEVTFVDSNGELRPQLTPAQLAEYGVNVSAFPAFNTLHEGETFTRIERYIPDASSRFDFATQRLNLSIPQAA
MNAQSRGYVDPARWDDGIPAAFVNYNLTGSQTRQTDDSSRSSYLNLRSGVNLGAWRLRNVSSMEYDRTRRWNSQSTWLQR
DLKSLKSLLRMGDTFTTGDVFDSVQFRGVQLMSDDEMLPDSQRGFAPTIRGMAHSNAKVTISQHGYVIYETFVSPGAFAI
NDLYPTAQSGDLEVQVKESDGSVRTFTQPFSAVPFMLREGRVKFSLSAGRYHSEQSQARSPTFLQGTLFYGLPAEFTLYG
GSQLAQDYQSWALGVGRGFGELGSLGGDATWANTTTPSGKRSAGHSVRVQYQKDFAGTGTSFSLASYRYSSGGYYDFSEA
SALESRNGLLDNKRSREEVSLSQAFGGMSSLAISAWSQEYWHRQSRDETIHLGFYSAWRGVSWGVGYYYTQSSDRQKDDR
SWSLNLSIPLGGPLSESAVSYSTTSDSNGRTSQQASLYGSLPRNPNLYYSLQQGYVNGGQGSNSSASLDYHGGYGTAQLG
YRRDSASHQLTWGASGSIVAHPHGVTLGQTVGESFAIVRAPGAADVAIQNGSNVHTDWRGYAVVPSLTAYRKNTITLDTE
SLADDADVELEGQTVIPGGGAVVQANYQTHIGSRVLFTLSDSHGPLPFGASVRLRKAKAIGARRRAAWWRMAGRSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2D AFH78429.1 putative fimbrial usher protein Virulence KpGI-5 Protein 4e-133 41
sfaF CAC16953.2 SfaF protein Virulence PAI III 536 Protein 5e-133 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A225_4514 YP_006500195.1 type 1 fimbriae anchoring protein FimD VFG0454 Protein 2e-127 42
A225_4514 YP_006500195.1 type 1 fimbriae anchoring protein FimD VFG1645 Protein 3e-133 41
A225_4514 YP_006500195.1 type 1 fimbriae anchoring protein FimD VFG0446 Protein 1e-119 41
A225_4514 YP_006500195.1 type 1 fimbriae anchoring protein FimD VFG0876 Protein 3e-138 41
A225_4514 YP_006500195.1 type 1 fimbriae anchoring protein FimD VFG0912 Protein 3e-133 41