Gene Information

Name : A225_4472 (A225_4472)
Accession : YP_006500153.1
Strain : Klebsiella oxytoca E718
Genome accession: NC_018106
Putative virulence/resistance : Unknown
Product : phage integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4712059 - 4713246 bp
Length : 1188 bp
Strand : +
Note : Phage P4-associated

DNA sequence :
GTGGCACGGACAACACGCCCCCTGACCAATACCGAAGTTCTTCGCGCTAAAGCGTTAGAGAAGGATCTAACGCTGCATGA
TGGCGATGGGCTTTTCTTGATAGTGAAAACCAGCGGAAAAAAGCTCTGGCGTTTCCGTTATCAACGTCCGGCAACAAAAC
AGCGAACAATGATGGGGCTCGGTCCCTTCCCCGCCCTCTCGCTTGCCGATGCCCGAGGGTTAAGAGCGGATTACCTTGCC
TTGTTAGCTAATGGCATCGACCCTCAAGTTCAAGCTGAAGTTGCAGAGGAAGAGCTGCAAATAGCTCTGGACAGTATTTT
TTTGACTGTCGCTGCTAACTGGTTCCAACTCAAAAGCAAAAGCGTTACCCCGGATTACGCAAAAGACATTTGGCGCTCAC
TGGAGAAAGATGTATTCCCTGCTATTGGTGAGATCCCCGTTCAGCAAATCAAAGCCCGAACATTGGTTGAAGCACTTGAG
CCAATCAAAGCTCGCGGGGCGCTTGAGACCGTACGTCGACTGGTGCAGCGCATTAACGAGATAATGATTTATGCCGTAAA
CACTGGTCTGATTGATGCCAATCCAGCATCAGGTGTTGGGATGGCCTTTGAGAAGCCCAAAAAACAAAACATGCCGACGC
TGCGGCCAGAAGAATTGCCGAAGCTGATGCGTTCTTTAGTCATGTCAAATCTGTCTGTTCCGACTCGCTGTCTAATCGAA
TGGCAGCTCCTGACCCTTGTGCGCCCTTCTGAGGCCTCCGGTGCTCGGTGGGCAGAGATCGATCTCGATTCAAAGCTCTG
GACAATTCCAGCCGAACGGATGAAGGCGAAGCGCGAGCATATTGTCCCCCTATCTTCTCAGGCATTAGAGATTCTGGAAG
TTATGAAGCCAATTAGTGCTCATCGTGAACATGTTTTTCCGAGTAGGAATGATCCAAAGCAACCAATGAATAGTCAGACG
GCAAATGCTGCGTTAAAACGAATTGGATATGGGGGGAAATTAGTAGCACATGGTTTAAGGTCAATCGCTAGCACATATTT
AAACGAAGAAGGATTAGAGAGCGATATTATTGAGAGTTGCCTCGCTCACATTGACAAGAATGAAGTACGGAGAGCATATA
ATCGTTCAACGTACCTAGAACGAAGAAAAATAACAATGGAATATTGGGGGGGATTTGTTAAAAGGTGA

Protein sequence :
MARTTRPLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGPFPALSLADARGLRADYLA
LLANGIDPQVQAEVAEEELQIALDSIFLTVAANWFQLKSKSVTPDYAKDIWRSLEKDVFPAIGEIPVQQIKARTLVEALE
PIKARGALETVRRLVQRINEIMIYAVNTGLIDANPASGVGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSVPTRCLIE
WQLLTLVRPSEASGARWAEIDLDSKLWTIPAERMKAKREHIVPLSSQALEILEVMKPISAHREHVFPSRNDPKQPMNSQT
ANAALKRIGYGGKLVAHGLRSIASTYLNEEGLESDIIESCLAHIDKNEVRRAYNRSTYLERRKITMEYWGGFVKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAK20803.1 integrase Not tested VPI Protein 1e-99 53
unnamed AAA82714.1 integrase Not tested VPI Protein 1e-99 53
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 1e-99 53
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 1e-99 53
int AAK20773.1 integrase Not tested VPI Protein 1e-99 53
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 1e-97 51
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 2e-83 46
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 4e-83 46
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 4e-83 46
int CAC39282.1 integrase Not tested LPA Protein 2e-65 41
aec33 AAW51716.1 Int Not tested AGI-3 Protein 9e-66 41
int AAD44730.1 Int Not tested SHI-2 Protein 8e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A225_4472 YP_006500153.1 phage integrase VFG1092 Protein 2e-83 46