Gene Information

Name : A225_3341 (A225_3341)
Accession : YP_006499045.1
Strain : Klebsiella oxytoca E718
Genome accession: NC_018106
Putative virulence/resistance : Virulence
Product : type 1 fimbriae anchoring protein FimD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3512206 - 3514872 bp
Length : 2667 bp
Strand : +
Note : -

DNA sequence :
TTGGCGGCGTGGGTAAAAGCCACACGCAGGTTCGCTAACCCGCCGCTGTCGACGGTTTGCGCTGCGGCAATTGCCGTCAG
TTCAGGAGCCTTTCAGGATGAACAAAAAACGTTAAGCGACTCGCCTTTGAATTTAGCTTACCTTATCGCCACCCAGGTTG
CCCTCATTGTGGTGATAAGCCCCTATGCTTACGCCCGTGAACGGTTCAACCCCGCCCATCTGGAAACCGGCGCAGACGGT
CTGGCCACCACCGATCTCTCCGCCTTCGAGGTGCGTGGCGGGCAGCAGCCCGGCCGCTACAGGGTGGATATTTATGTCAA
TGACAGCAAGGTGGATACCCGGGACGTTGAGTTCCGCATGCAGCAAAACGCGCAGGGACAGAGCGCATTACAGCCCTGTC
TCTCCCTGAACGATTTGGCCTCATGGGGCGTCATGATCCAGCGTTATCCGACGTTAGGCCAGCCCGATGCCAGCTGCGCA
AGGCTGTCGGCGATTCCTCAGGCCAGCGCCGACTTTCGTTTCTCGCACCAGCAGCTGCTGTTAAGTTTTCCCCAATCCTC
CCTTACCAACGCCGCGCGCGGCTGGGTCGATCCTGCGCGGTGGGATGACGGCATTCCGGCAGCGCTGGTTAATTACAGCG
TCAGCGGCGCCAACAACCGGGACAAAAAAGGCGACGACGGCGACGGAAACGCGCAGTACATTAATTTACGTCCCGGTCTT
AATATCGGTCCCTGGCGATTGCGTAATTACACCACCTGGAACCGCAGCCATCAGGGTGGCGAAAACGGCACCTCAACAAA
ATGGGATACCGTTTATACCTACGCCCAGCGCGATATACGCACGCTGAAGAGCCGACTGACGCTGGGCGATAGCACCACGC
CTTCCGATATTTTCGACAGTATTCCGTTTCGCGGCGGCCAGCTTGCGTCTGATGACGATATGCTGCCGGAGAGCCTGCGC
GGCTATGCCCCCGTTGTGCGGGGGATTGCTCGCACCCATGCCCAGGTTACGATCCGGCAAAACGAATACATCATTTATCA
GACCTACGTTTCGCCCGGCAGCTTCGAAATCACCGATATGTACCCCACCGGCGGTTCCGGGGACCTGTACGTTACCATCA
AAGAGTCTGACGGCAGCGAACAATTCCTCGTGGTGCCCTACGCCTCGGTCCCGGTGCTGCAGCGCGAAGGTCGGTTAAAA
TACGCCATGACCGCCGGCGTTTACCGCGCCTATGACAACGGCATTGATAAAGCTCCGCTGGCCGCCGGCACGGCGATTTA
TGGCCTTCCCGCCGGCTACACCGTATACGGTGGCGGCCAGTTCAGTAAAAGATACCAGGCGTTAGCTCTGGGCATAGGTA
AAAACCTGGGTCCCATTGGCGCCCTATCCACCGATATCACCCAGGCCTGGTCGCAGCAAAAAAATCGACCACGAGAAGAA
GGCCAATCCTGGCGTATTCGCTACAGCAAAAACCTGGTGCAGACCGGGACTAACTTCACCTTCGCGGGCTATCGCTATGC
CACCAGCGGCTACTGGGATATGCAGGACGTTCTCAATACCTGGCGCGACGGACGGCGCTATGTGATGCCGGAACGCCGAC
GCAACCGCGCCGAGTTAACCGTCAGCCAGAACCTGTTTCAGATCCCAGGCAACCTCGCGCTTAGCGCCATCGTGGAAGAC
TACTGGGATACCAACAAGCGCATGGAGTCATATAGCGCGAGCTACAACGGTTCGTATAAAGGCATCAGTTTCGGTCTGAG
CTACAGCTATAACATTCACTCCGCGGAACGCTACGGCCAGCGCTCCGGGCGCATCTACGACCGCGATGGGCTGTTTGCGC
TCACCATGAGTATTCCTCTGGAGAAATTATTCGGCGGCCATCCCACCTACGTTAGCTACATGATGAATACCAGTAAGCAG
GGGAATACCACCAATAATCTGAGCCTGGGCGGTACCCTGCTGGCCGATAACAATCTGAGCTGGAGCGTCATGCAGGGCTA
TGGTTCTCAGGGCCAGGGAAGCAATAGCGGGATTAATGCCGACTGGCGCGCCTCTTACGCCGAGACCCTCGTCGGCTACG
CCCGCGATCGCTACAGCGAACGCGTTAACTATGGTGTGCAGGGCGGGATCGTGGCGCATCGCAACGGCCTCACCTTTAGC
CAGCCCCTCGGCGAAACGATGGCGCTGATCGCCGCGCCCGGCGCACAAAACGTAGCGGTGCTTGGGCAGTCAGGCGTCAA
AACCGATCGCTTCGGCTACACCGTCGTCCCCTACCTCAGCCCCTATCGCAAAAACGATCTCACGCTGAATACCGAAACCC
TGGCCGATGATGCCGAACTGGCGCTGGCAACGCAGACGGTCATCCCCACGCGCGGCGCACTGGTGAAGGCCAGCTATGAA
ACCAGCCTCGGTAAACGGGTCCTGATGACCCTGAGAAAACGCAACGGCTCGTCGGTACCGTTCGGCGCAACGGTTATCGA
TCCCGCCTCCCCGACGCCAAAAAGCTTCATCGTAGGCGATGGAGGACAGGTTTATCTGACAGGGCTAAAAGACGCGGGTC
AGCTGGAGGTTAGCTGGAGTCACGACCCTGATGGCCGATGCAGAGTGAATTACAGCCTGACGCAAAACGCCGGCGGGATT
ATCAACCTTAATGCACAGTGTTTATAG

Protein sequence :
MAAWVKATRRFANPPLSTVCAAAIAVSSGAFQDEQKTLSDSPLNLAYLIATQVALIVVISPYAYARERFNPAHLETGADG
LATTDLSAFEVRGGQQPGRYRVDIYVNDSKVDTRDVEFRMQQNAQGQSALQPCLSLNDLASWGVMIQRYPTLGQPDASCA
RLSAIPQASADFRFSHQQLLLSFPQSSLTNAARGWVDPARWDDGIPAALVNYSVSGANNRDKKGDDGDGNAQYINLRPGL
NIGPWRLRNYTTWNRSHQGGENGTSTKWDTVYTYAQRDIRTLKSRLTLGDSTTPSDIFDSIPFRGGQLASDDDMLPESLR
GYAPVVRGIARTHAQVTIRQNEYIIYQTYVSPGSFEITDMYPTGGSGDLYVTIKESDGSEQFLVVPYASVPVLQREGRLK
YAMTAGVYRAYDNGIDKAPLAAGTAIYGLPAGYTVYGGGQFSKRYQALALGIGKNLGPIGALSTDITQAWSQQKNRPREE
GQSWRIRYSKNLVQTGTNFTFAGYRYATSGYWDMQDVLNTWRDGRRYVMPERRRNRAELTVSQNLFQIPGNLALSAIVED
YWDTNKRMESYSASYNGSYKGISFGLSYSYNIHSAERYGQRSGRIYDRDGLFALTMSIPLEKLFGGHPTYVSYMMNTSKQ
GNTTNNLSLGGTLLADNNLSWSVMQGYGSQGQGSNSGINADWRASYAETLVGYARDRYSERVNYGVQGGIVAHRNGLTFS
QPLGETMALIAAPGAQNVAVLGQSGVKTDRFGYTVVPYLSPYRKNDLTLNTETLADDAELALATQTVIPTRGALVKASYE
TSLGKRVLMTLRKRNGSSVPFGATVIDPASPTPKSFIVGDGGQVYLTGLKDAGQLEVSWSHDPDGRCRVNYSLTQNAGGI
INLNAQCL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2D AFH78429.1 putative fimbrial usher protein Virulence KpGI-5 Protein 2e-119 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A225_3341 YP_006499045.1 type 1 fimbriae anchoring protein FimD VFG0454 Protein 1e-138 42
A225_3341 YP_006499045.1 type 1 fimbriae anchoring protein FimD VFG0876 Protein 7e-126 42
A225_3341 YP_006499045.1 type 1 fimbriae anchoring protein FimD VFG0446 Protein 1e-117 41
A225_3341 YP_006499045.1 type 1 fimbriae anchoring protein FimD VFG0944 Protein 4e-128 41