Gene Information

Name : A225_2131 (A225_2131)
Accession : YP_006497856.1
Strain : Klebsiella oxytoca E718
Genome accession: NC_018106
Putative virulence/resistance : Resistance
Product : transcriptional activator RamA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2264028 - 2264390 bp
Length : 363 bp
Strand : +
Note : -

DNA sequence : 
ATGTTTATTTCCGAAACAGTGATAGCCGTCATCATTGACTGGATCGACAATAACTTACATAAACCACTGCGTATAGAACA
GATAGCCCGTTATTCAGGGTATTCCAAATGGTACCTGCAGCGTTTGTTCTTGCAATATAGAGGCGAGAGCCTCGGGCGCT
ATATCCGTAATAAAAAACTGGACTCAGCGGCCCGCGATTTACGCGAGACCGATGAGAATATTTACAGTATTGGTTTGCGC
TACGGCTATGGCTCGCAGCAAACATTCACCCGATTATTTACGCGTCATTTTCATTTGCCGCCCGGTGAATATCGCAAGAA
AAACAAAACAGCCTGTTACGTACCGGGTAAGGCTGAATCTTAA

Protein sequence : 
MFISETVIAVIIDWIDNNLHKPLRIEQIARYSGYSKWYLQRLFLQYRGESLGRYIRNKKLDSAARDLRETDENIYSIGLR
YGYGSQQTFTRLFTRHFHLPPGEYRKKNKTACYVPGKAES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 3e-22 46
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 2e-18 43
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 2e-18 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A225_2131 YP_006497856.1 transcriptional activator RamA CP001138.1.gene612.p Protein 7e-36 66
A225_2131 YP_006497856.1 transcriptional activator RamA CP001918.1.gene2033. Protein 4e-21 48
A225_2131 YP_006497856.1 transcriptional activator RamA CP000647.1.gene4499. Protein 1e-22 47
A225_2131 YP_006497856.1 transcriptional activator RamA CP000647.1.gene1624. Protein 8e-21 47
A225_2131 YP_006497856.1 transcriptional activator RamA CP001138.1.gene1637. Protein 4e-21 47
A225_2131 YP_006497856.1 transcriptional activator RamA CP001138.1.gene4488. Protein 9e-23 46
A225_2131 YP_006497856.1 transcriptional activator RamA BAC0371 Protein 2e-22 46
A225_2131 YP_006497856.1 transcriptional activator RamA NC_002695.1.914293.p Protein 2e-22 46
A225_2131 YP_006497856.1 transcriptional activator RamA CP001918.1.gene327.p Protein 1e-22 46
A225_2131 YP_006497856.1 transcriptional activator RamA CP000034.1.gene4505. Protein 4e-22 45
A225_2131 YP_006497856.1 transcriptional activator RamA BAC0560 Protein 2e-21 45
A225_2131 YP_006497856.1 transcriptional activator RamA NC_002695.1.917339.p Protein 2e-21 45
A225_2131 YP_006497856.1 transcriptional activator RamA CP000034.1.gene1596. Protein 2e-21 45
A225_2131 YP_006497856.1 transcriptional activator RamA NC_010558.1.6276025. Protein 1e-18 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A225_2131 YP_006497856.1 transcriptional activator RamA VFG0585 Protein 8e-23 46
A225_2131 YP_006497856.1 transcriptional activator RamA VFG1038 Protein 9e-19 43