Gene Information

Name : A225_1534 (A225_1534)
Accession : YP_006497279.1
Strain : Klebsiella oxytoca E718
Genome accession: NC_018106
Putative virulence/resistance : Virulence
Product : General secretion pathway protein F
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1611664 - 1612884 bp
Length : 1221 bp
Strand : +
Note : -

DNA sequence :
GTGTTATTCCATTATCAGGTGTTAGACGAGCGGGGTAAAAAGCGGCGGGGGAGCCTGGAGGCAGATTCCGCTCGTCATGC
GCGTCAACGCTTACGAGAACAAGGGCTGGTTCCGCTGGCGCTGGTCGAAGGGCTGAATGAGGCCCGGCGGAATAAACGCG
GGTGGCGTATTTCCTGGTCGCGTGGAATAAGCAGCGCCGATCTGGCGCTGCTGACTCGCCAGCTGGCGACGCTGGTCGCC
GCCGCTTTACCTCTGGAAGATGCGCTGGATGCGGTGGCAAAACAAAGTGAAAAACCGCGCCAGCGTAGCCTGATGGCCGC
CGTGCGTAGCAAAGTTCTTGAAGGTCATTCGCTGGCGGAAGCGATGGCAGGATATCCTGCCAGTTTTGAGCGGTTGTACT
GCGCGATGGTGGCGGCGGGTGAAGCTTCTGGTCACCTGGACCAGGTTCTGAATCGACTCGCTGATTACACCGAACAGCGC
CAGCAAATGCGAGCGCGCATCATGCAGGCCATGATTTATCCCTGCGTACTTACCGTTGTCGCTATTAGCGTCGTTGCCAC
GCTTCTTTCTGCCGTCGTTCCCAGGGTCGTTGAGCAGTTTATTCATATGAAGCAGGCGCTACCGCTATCAACGCGAGTGC
TCATGGCGATGAGCGACGGGGTTCGCACTTTTGGTCCCGGGATACTGTTGCTGCTGTTCGCCGGGCTGGTGCTGATACGT
CGATTGCTACGTCATGAAGGTCGACGTATTGCCGTTCATCATCGGCTGCTGCGCCTGCCCGTTATTGGGCGCGTTGCGCG
CGGCCTGAATACCGCTCGTTATGCCAGAACGCTGAGTATTCTGAACGCCAGTTCCGTGCCGTTGCTGCAAGCGATGCGTA
TTAGCGGCGAGGTGCTCACCAACGAATATGCGCGTCAACAGCTGTCGTTAGCGACGGAATCGGTGCGCGAGGGGGTTAGC
CTGCATCGCGCGCTGGAAATGACCGAACTCTTTCCCCCCATGATGCGCCATATGATCGCCAGCGGTGAACGTAGTGGGGA
ACTGGACAGCATGCTGGAACATGCTGCGGATAACCAGGACCGGGAATTTACGTCTCACATGCAATTAGCGCTGGGGCTGT
TTGAGCCTCTCTTGATCGTCGGTATGGCGGCAATAGTGTTATTTATCGTCATCGCCATTCTGCAACCGATCCTGCAATTA
AATAATTTAATCAGTATGTGA

Protein sequence :
MLFHYQVLDERGKKRRGSLEADSARHARQRLREQGLVPLALVEGLNEARRNKRGWRISWSRGISSADLALLTRQLATLVA
AALPLEDALDAVAKQSEKPRQRSLMAAVRSKVLEGHSLAEAMAGYPASFERLYCAMVAAGEASGHLDQVLNRLADYTEQR
QQMRARIMQAMIYPCVLTVVAISVVATLLSAVVPRVVEQFIHMKQALPLSTRVLMAMSDGVRTFGPGILLLLFAGLVLIR
RLLRHEGRRIAVHHRLLRLPVIGRVARGLNTARYARTLSILNASSVPLLQAMRISGEVLTNEYARQQLSLATESVREGVS
LHRALEMTELFPPMMRHMIASGERSGELDSMLEHAADNQDREFTSHMQLALGLFEPLLIVGMAAIVLFIVIAILQPILQL
NNLISM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspF CAE85232.1 GspF, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-73 57
gspF YP_854405.1 type II secretion protein GspF Not tested PAI I APEC-O1 Protein 2e-73 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A225_1534 YP_006497279.1 General secretion pathway protein F VFG2049 Protein 3e-71 56
A225_1534 YP_006497279.1 General secretion pathway protein F VFG0181 Protein 5e-68 50
A225_1534 YP_006497279.1 General secretion pathway protein F VFG1870 Protein 6e-60 43