Gene Information

Name : A225_1533 (A225_1533)
Accession : YP_006497278.1
Strain : Klebsiella oxytoca E718
Genome accession: NC_018106
Putative virulence/resistance : Virulence
Product : General secretion pathway protein E
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1610154 - 1611659 bp
Length : 1506 bp
Strand : +
Note : -

DNA sequence :
ATGAATATGTCTGTTGCCGACGTGAATAAACCGCATCCGCAGCTTCCCTTTGCCTATGCGCATGCTCAACGCATTTTACT
GCAGTGGGAGAATACTGAATGCCGGGTGCTGCGCGTCGTGGAAACGACAGCCGCAGCGTTGCTTGAAACCCGTAGGGTTG
CCGGGTGTGCCCTGAATATTCGTACGCTATCGAATGCGGAATTTGAGAAACAACTGATTAGTAGTTACCAGCGAGACTCA
ACCGAAACGCGGCGACTGATGGTTGATATCGGCAACGAAGTGGATTTTTATACCCTGGCGGAAGAGTTACCTGACAGCGA
TGATTTACTGGATGCCGATGATGATGCTCCGATAATCCGTCTGATTAATGCCATGCTGACCGAGGCGATTAAGGATAAAG
CGTCAGATATTCACATCGAAACCTATGAACGTCATTTGCAAATTCGCTTTCGGGTAGATGGCGTACTGCGTGAAATATTA
CGCCCTCAGCGCCGTCTGGCTTCTTTATTGATCTCTCGTATTAAGGTTATGGCGCGGTTGGATATCGCGGAAAAGCGTAT
TCCTCAGGATGGGCGCATGGCGTTACGCATTGGCGGCCGGGCGATTGATGTGCGAGTGTCGACTTTACCTTCTCATTACG
GTGAACGAATTGTTCTGCGTTTGCTGGATAAAAGCAGCGTGAATTTGGATCTGTCGACGTTAGGCATGTCGTTATCACAC
CAGCAGCAGATCGATGAACTGATTCAGCGGCCGCACGGTATTCTCCTCGTCACCGGTCCGACAGGTTCAGGGAAGAGCAC
GACGCTTTATGCGGCGTTGAGTCGTCTCAATGCGAGTGAACGCAATATTATGACGATTGAAGATCCTATTGAGTATGAGC
TCGAGGGGATTGGCCAGACGCAGGTAAACGCCAAAGTGGAGATGACTTTTGCGCGCGGTTTACGCGCCATTCTGCGTCAG
GACCCTGATGTCGTACTGGTTGGGGAGATCCGCGATAGTGAAACCGCGCAGATTGCGGTTCAGGCATCCTTGACCGGGCA
TTTGGTTCTTTCAACGCTCCATGCCAACAGTGCGTTGGGGGCATTATCACGTCTGCAAGATATGGGGATTGAACCTTTTT
TACTGTCTACGTCGTTATTGGCCGTATTGGCGCAGAGGCTGGTGCGGACTCTTTGCCCCGATTGCCGCCAGCCCTACTTA
GTCGCTCCCGCGTTGGCCCATCAGATGGGGATTGCGCCCGGAGCTCGCTTATGGCAGCCGAAGGGATGTCCGCAATGCGG
CTTTACTGGCTATCGTGGGCGTACCGGGATACATGAATTACTGCTGATTGACGATAGGATCCGTACCGCAATCCATAAGG
GCCACGGCGAGTTCGCGATTGCCCGCTTACTGCAGCATGAATACAAAACGTTACGCTATGCCGGGCTGGAAAAAGCCCTG
TCCGGCGAGACAAGCTGGGAAGAGGTCATCCGGGTGACTGAAAACCAGTCGCAGGAAAAGGAGTGA

Protein sequence :
MNMSVADVNKPHPQLPFAYAHAQRILLQWENTECRVLRVVETTAAALLETRRVAGCALNIRTLSNAEFEKQLISSYQRDS
TETRRLMVDIGNEVDFYTLAEELPDSDDLLDADDDAPIIRLINAMLTEAIKDKASDIHIETYERHLQIRFRVDGVLREIL
RPQRRLASLLISRIKVMARLDIAEKRIPQDGRMALRIGGRAIDVRVSTLPSHYGERIVLRLLDKSSVNLDLSTLGMSLSH
QQQIDELIQRPHGILLVTGPTGSGKSTTLYAALSRLNASERNIMTIEDPIEYELEGIGQTQVNAKVEMTFARGLRAILRQ
DPDVVLVGEIRDSETAQIAVQASLTGHLVLSTLHANSALGALSRLQDMGIEPFLLSTSLLAVLAQRLVRTLCPDCRQPYL
VAPALAHQMGIAPGARLWQPKGCPQCGFTGYRGRTGIHELLLIDDRIRTAIHKGHGEFAIARLLQHEYKTLRYAGLEKAL
SGETSWEEVIRVTENQSQEKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-131 61
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 2e-131 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A225_1533 YP_006497278.1 General secretion pathway protein E VFG2048 Protein 7e-131 60
A225_1533 YP_006497278.1 General secretion pathway protein E VFG0182 Protein 2e-125 59
A225_1533 YP_006497278.1 General secretion pathway protein E VFG1876 Protein 1e-116 53
A225_1533 YP_006497278.1 General secretion pathway protein E VFG2426 Protein 2e-74 46