Gene Information

Name : CULC0102_0060 (CULC0102_0060)
Accession : YP_006493495.1
Strain : Corynebacterium ulcerans 0102
Genome accession: NC_018101
Putative virulence/resistance : Virulence
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 62637 - 63407 bp
Length : 771 bp
Strand : -
Note : -

DNA sequence : 
ATGAACATCGAATTTGATTGCGTGAGCGTGGAATTATCCGGCCGAACTGTCGTTGATCAAGTCAGCGCTTCAGCGGAATC
TGGCCAGATCCTCGGGCTGGTGGGACCAAACGGTTCAGGCAAGTCCACGCTTCTTCGCACCGTATACCGCGGCCTTAACC
CCGCATCAGGAACCGTACGACTAGGAGGTGAGGATGTTCGCACGCTTTCCCATCGCGAGGTTGCCCGGCGCGTGGCGGTC
ATGTTGCAGGATTCTCCCACCGATTTCGATTTAACCGTTGAAGAGACAGTGATGTTGGGGCGCGCCCCGCATCATTCGAT
TCTGGGCCGAGATACCGGCGAGGACGTCCACATCGTGGAGGAGGCGATGCACGCCACCGACGTCGTAAAGCTCGCGGACC
GCATGGTCTCCACGCTGTCCGGCGGCCAGCGACAACGGGTGCTCCTCGCCCGCGCGCTTGCCCAGCGCACCCCGGCTTTG
CTTCTCGACGAACCCAGCAACCACCTCGACATCAGCCACCAACATGAGCTCATGTCCACCGTGGCTTCTCGTGGTGGCAC
AGTCATTGCAGCACTGCACGACCTGAATCTTGCAATGCAGTATTGCGACCGGATACTCCTCCTCAAACAGGGATCAGTGG
TGGCTATGGGCACCCCTTCACACGTTCTCACACCAGAACTCATCCGCGAGACCTTTGCCATCAACGCCCATTTACTCCCA
GGGCCAGTAGATCCTGTTCTCGCGTTTACTCCCCTTTCCTCCAGCCTTTAA

Protein sequence : 
MNIEFDCVSVELSGRTVVDQVSASAESGQILGLVGPNGSGKSTLLRTVYRGLNPASGTVRLGGEDVRTLSHREVARRVAV
MLQDSPTDFDLTVEETVMLGRAPHHSILGRDTGEDVHIVEEAMHATDVVKLADRMVSTLSGGQRQRVLLARALAQRTPAL
LLDEPSNHLDISHQHELMSTVASRGGTVIAALHDLNLAMQYCDRILLLKQGSVVAMGTPSHVLTPELIRETFAINAHLLP
GPVDPVLAFTPLSSSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-42 46
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 5e-31 44
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 5e-31 44
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 8e-31 44
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 6e-31 44
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-39 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-39 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-39 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-39 42
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 9e-42 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CULC0102_0060 YP_006493495.1 putative ABC transporter ATP-binding protein BAC0164 Protein 2e-42 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CULC0102_0060 YP_006493495.1 putative ABC transporter ATP-binding protein VFG1042 Protein 2e-42 46
CULC0102_0060 YP_006493495.1 putative ABC transporter ATP-binding protein VFG0925 Protein 3e-40 42