Gene Information

Name : CULC0102_0039 (CULC0102_0039)
Accession : YP_006493474.1
Strain : Corynebacterium ulcerans 0102
Genome accession: NC_018101
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 39788 - 40654 bp
Length : 867 bp
Strand : -
Note : -

DNA sequence : 
ATGCATACACCCAACATCTCCTCCACAGCCTCGTCTCCGACACCCAACGCTTCCACAGCCACTAGCTCCGCGCTTCGCAC
AGAAAATGTCACCCTCAGCTGGGATAAGCACGTGGTGAGCACCAACCTGAGCGTCGATATCCCCGCAGGAAAGTTCACGG
CAATCATCGGTCCTAACGGATGCGGAAAATCAACGTTGCTTAAAAGCTGCGCCCGCATTCTTGCCCCGGATACCGGCTCT
ATGTATCTCCACGGGCACGACCTCACCCACCTGCACACCAAGGAGATAGCCAAGCAGCTCGCACTTCTCCCCCAGAGCAC
CATCACCCCCGCCGACATCACCGTAGAAGAGCTCGTCCGCCGCGGGCGATTCCCCCACCACAATTGGTTGCATCAGTGGA
CCAAGGAAGACACTCGGGCCGTCGATGCCGCGCTCAGTGCCGCCAGCGTGAAAGAACTCACACACAAGCGCGTCACTGAT
TTATCTGGTGGTCAGCGCCAGCGCGTGTGGCTTGCCATGGTTCTCGCCCAGAACACCCCTACGGTGCTTCTCGACGAACC
CACCACCTTCCTAGACATCGCCCACCAGTACCAGCTCCTTGAGCTAGCGCGTTCCCTGACAACCCAGCTCAATCGCACTG
TCGTCGCGGTACTCCACGATCTCCAGCAAGCCGTCCGCTACGCCGACCATCTGATTGTTATGAAAAATGGAAGCGTCGTA
GCCACAGGATCACCCAAAGACGTGATCAGTGCAGAGCTCATATCCGAGGTCTTTAACATCACCGTTCGCACCACGCTTAT
CGACGACCAACTCATCGTCATCCCAACCGAATTGCCAGTGCCAAACGTCGCAATGATGCAGGACTAG

Protein sequence : 
MHTPNISSTASSPTPNASTATSSALRTENVTLSWDKHVVSTNLSVDIPAGKFTAIIGPNGCGKSTLLKSCARILAPDTGS
MYLHGHDLTHLHTKEIAKQLALLPQSTITPADITVEELVRRGRFPHHNWLHQWTKEDTRAVDAALSAASVKELTHKRVTD
LSGGQRQRVWLAMVLAQNTPTVLLDEPTTFLDIAHQYQLLELARSLTTQLNRTVVAVLHDLQQAVRYADHLIVMKNGSVV
ATGSPKDVISAELISEVFNITVRTTLIDDQLIVIPTELPVPNVAMMQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-119 91
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-119 91
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-119 91
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-119 91
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 5e-56 50
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-56 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-45 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-46 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-46 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-46 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 9e-46 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CULC0102_0039 YP_006493474.1 ABC transporter ATP-binding protein BAC0164 Protein 3e-56 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CULC0102_0039 YP_006493474.1 ABC transporter ATP-binding protein VFG0925 Protein 1e-62 50
CULC0102_0039 YP_006493474.1 ABC transporter ATP-binding protein VFG1042 Protein 3e-56 50