Gene Information

Name : CULC0102_2099 (CULC0102_2099)
Accession : YP_006495532.1
Strain : Corynebacterium ulcerans 0102
Genome accession: NC_018101
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2274082 - 2276631 bp
Length : 2550 bp
Strand : -
Note : -

DNA sequence :
ATGAATTCATTCAATCCAACAACTAAAACGCAAGAGGCTTTGCAGGTTGCGCTGCAGCAGGCCTCGTCGCTGGGCAATCC
GGATATTCGCCCAGCTCATTTACTTGCAGCGATCTTAGGTCAGGAAGATGGCATTGCGGTGCCGGTCTTGCGTGCTACGG
GCGTGGACCCGCAGGTGGTGGCGCAGGAGGCCAACGCGCTTGTGGCAGGGTATCCCAAGGCTGAGGGTTCTGGGATGGCA
AATCCCAACTTTAACCGCGAGGCTTTGAACGCGCTGACCGCTGCGCAGGAGCTGGCTGGCGAATTAGGCGATGAGTATGT
GTCCACCGAGGTGCTGCTCGCTGCGATTGCTCGGGGAAAGTCCGATGCTGCGGAATTACTGACTAAGCGAGGCGCTACCT
ATGACGTTATTAAAGGTGTGTTCCCCTCTGTGAGAGGAAGCAAGAAGGTGACTAGCCAAGACCCCGAGGGGCAGTTCCAG
GCTTTGGAGAAATACTCCACTGACCTTACGGCTCGTGCACGCGAGGGGAAGATCGACCCTGTTATTGGGCGTGACTCGGA
GATCCGCCGTGTGGTTCAGGTGTTGAGTCGCCGCACCAAGAATAATCCGGTTCTTATTGGTGAGCCGGGCGTGGGTAAGA
CCGCGATTGTAGAAGGTTTGGCTCGCCGGATCGTCGCCGGCGACGTGCCGGAATCTCTGAAGGGGAAGACCCTGATTAGC
CTTGACCTTGGCTCGATGGTCGCTGGTGCTAAGTACCGTGGCGAGTTTGAGGAGCGCCTCAAGGCTGTGCTTGATGAGAT
CAAGGCAGCAGAAGGTGAGGTCATTACCTTTATTGATGAGCTGCACACCATCGTTGGTGCGGGCGCTACCGGGGATTCCG
CTATGGATGCCGGCAACATGATTAAGCCGCTGCTGGCTCGTGGCGAGCTGCGCTTGGTGGGTGCCACCACCCTCGATGAG
TATCGCAAGTACATCGAGAAGGATGCTGCTTTGGAGCGCCGTTTCCAGCAGGTCTTTGTCGGCGAGCCATCTGTGGAGGA
CGCCATCGGTATCCTGCGCGGACTCAAAGAGCGCTATGAGGTGCATCATGGCGTGCGTATTCAAGATTCTGCATTGGTTG
CTGCGGCGACTCTTTCGGATCGCTACATCACGTCGCGTTTCTTGCCAGATAAGGCGATTGACCTGGTCGATGAGGCCGCT
AGCCGGCTGCGCATGGAGATCGATTCTTCCCCGCAGGAGATCGACGAGCTGGAGCGCATCGTGCGGCGTTTGGAGATTGA
AGAGGTCGCGCTGGGCAAAGAGACGGATGTGGCGTCTCAGCAGCGCTTGGAGAAGTTGCGCCAGGAGCTTGCCGACGAAC
GCGAGAAGCTCGGTGAGCTCAAAGCCCGCTGGAACAATGAGAAATCTGCAATAGATAAGGTGCGCGAGGCCAAGGAAGAA
TTGGAACACCTGCGTTCTGAGTCCGAGATCGCTGAGCGCGAAGGCGATTACGGCAAGGTAGCTGAGCTGCGCTATGGCCG
AATCCCGGAGTTGGAAAAGCAGGTGGCTGAGGCTGAGTCTCATACCACTGACACCACGATGCTTTCGGAGGAAGTCACCC
CGGACACTATCGCGGACGTTGTCTCTGCATGGACTGGTATTCCCGCAGGCAAGATGCTTCAGGGCGAGACTGAGAAGCTT
CTACACATGGAATCCGAGCTGGGTAACCGGGTAGTGGGCCAGCTAGAAGCCGTGGAGGCGGTATCTGATGCGGTGCGTCG
TGCGCGCGCTGGTGTGGCTGATCCGAATCGTCCGACTGGTTCGTTCCTCTTCCTCGGTCCTACAGGCGTGGGTAAGACTG
AGCTGGCCAAAGCCTTGGCTGAGTTCATGTTTGATGATGAACGTGCGATGGTACGCATTGATATGTCTGAGTACGGGGAG
AAACACTCCGTGGCTCGGCTGGTTGGTGCCCCTCCCGGATATGTTGGTTACGATCAGGGCGGCCAGCTCACCGAGGCCGT
GCGTCGGCGTCCTTACACAGTAGTGCTTTTCGACGAAGTGGAGAAAGCTCACTCCGACGTCTTTGACATCCTGCTGCAGG
TGCTCGACGAGGGCCGGCTTACCGACGGCCAAGGCCGTACCGTCGACTTCCGAAACACCGTCCTCATCCTCACCTCTAAC
CTGGGAGCCGGTGGCACCCGCGAGCAGATGATGGATGCCGTCAAGCGGGCCTTTAAGCCGGAATTTGTTAACCGCTTGGA
TGACGTAGTGATTTTTGATCCACTCTCAGAAGAGCAACTGACCCACATCGTGGACATCCAGATCGCTCAGCTGGCAGACC
GTCTTTCGGCGCGCCGCCTGACTCTGAATGTCTCGGATGCTGCCAAGCTATGGCTGGCTGAACGCGGTTACGAGCCGGCT
TATGGTGCACGACCATTACGCCGCCTGATCCAGCAGGCGATTGGCGACCAGCTAGCTAAGAAGCTGCTGGCAGGTGAGAT
CCGCGACGGCGATACCGTGCACGTGGATGTGGCCGATGGTGGCGGGGCTTTGGAACTGGCGAAGGGCTAA

Protein sequence :
MNSFNPTTKTQEALQVALQQASSLGNPDIRPAHLLAAILGQEDGIAVPVLRATGVDPQVVAQEANALVAGYPKAEGSGMA
NPNFNREALNALTAAQELAGELGDEYVSTEVLLAAIARGKSDAAELLTKRGATYDVIKGVFPSVRGSKKVTSQDPEGQFQ
ALEKYSTDLTARAREGKIDPVIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLIS
LDLGSMVAGAKYRGEFEERLKAVLDEIKAAEGEVITFIDELHTIVGAGATGDSAMDAGNMIKPLLARGELRLVGATTLDE
YRKYIEKDAALERRFQQVFVGEPSVEDAIGILRGLKERYEVHHGVRIQDSALVAAATLSDRYITSRFLPDKAIDLVDEAA
SRLRMEIDSSPQEIDELERIVRRLEIEEVALGKETDVASQQRLEKLRQELADEREKLGELKARWNNEKSAIDKVREAKEE
LEHLRSESEIAEREGDYGKVAELRYGRIPELEKQVAEAESHTTDTTMLSEEVTPDTIADVVSAWTGIPAGKMLQGETEKL
LHMESELGNRVVGQLEAVEAVSDAVRRARAGVADPNRPTGSFLFLGPTGVGKTELAKALAEFMFDDERAMVRIDMSEYGE
KHSVARLVGAPPGYVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHSDVFDILLQVLDEGRLTDGQGRTVDFRNTVLILTSN
LGAGGTREQMMDAVKRAFKPEFVNRLDDVVIFDPLSEEQLTHIVDIQIAQLADRLSARRLTLNVSDAAKLWLAERGYEPA
YGARPLRRLIQQAIGDQLAKKLLAGEIRDGDTVHVDVADGGGALELAKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 6e-98 42
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 8e-101 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 6e-101 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CULC0102_2099 YP_006495532.1 ATP-dependent Clp protease ATP-binding subunit VFG2076 Protein 3e-110 41