Gene Information

Name : CULC0102_1680 (CULC0102_1680)
Accession : YP_006495114.1
Strain : Corynebacterium ulcerans 0102
Genome accession: NC_018101
Putative virulence/resistance : Virulence
Product : putative iron ABC transport system, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1812069 - 1812953 bp
Length : 885 bp
Strand : -
Note : -

DNA sequence : 
ATGTCCGCAACCCCTCCTAGTCGCAAATACTGGGACACCTCGACTTCTGACACCGTTGCAACCGCACTGGGCGAGCGAGG
ACAGACAGACGGACTGCGCGTGGAGGCCCGAGGCTTGCAGATCGGGTACGCGCCCGGTGAATTTGTGGTCGACGGGCTAG
ACCTCACCGCAGAGCCGGGCACAGTAACAACCTTGCTGGGGCCGAATGGCTGCGGTAAATCTACCGTGCTGAAGTCGCTG
AGCCGCGTGCTCACCCCACAGGGTGGAACCGTGACAGTTGGCGGACACAATGTGCATCGCCTGCCCCCACGCGAGGTTGC
GCGGATGATCGGGATGCTGCCGCAATCGCCGCTGTGTCCCCAAGGGCTCACCGTCGGTGAACTCGTGGCGCGCGGCCGGC
ATCCGCACCAACGTCGCTGGATGCGACAATCGGAGAAGGATCGTCAGGCCATTGGCCAGGCTTTAGAGCACACCAACACC
GCCGCTTTGGTGGATTGCGACGTTTCCGAGCTCTCAGGTGGCCAGCGCCAGCGGGTGTGGATGGCCATGGTTGTGGCACA
GGAAACTCCGGTGGTGCTCCTGGACGAGCCCACCACGTACTTAGACCCAGCTCACGCCATCGACATACTGAAGCTGGCCA
AAGACCTGGCCTCTCAAGGCAAAACGGTCATCATGGTGTTGCATGACCTCATGCTGGCCGGAACGTATAGCGACCGGCTG
GTGCTGCTCAAGGCGGGTGAGATCGTGGGCCAGGGTAGTGCCACAGAAGTGCTTACCCAGGAAAAACTTGCTCAATGCTA
CGGCCTGCGCGCCGAAGTATGGGAAGACCCACGGGGGCAAGCGCCCGTTATCGTGCCACGCGGAACGATACACCTGAACG
AATAG

Protein sequence : 
MSATPPSRKYWDTSTSDTVATALGERGQTDGLRVEARGLQIGYAPGEFVVDGLDLTAEPGTVTTLLGPNGCGKSTVLKSL
SRVLTPQGGTVTVGGHNVHRLPPREVARMIGMLPQSPLCPQGLTVGELVARGRHPHQRRWMRQSEKDRQAIGQALEHTNT
AALVDCDVSELSGGQRQRVWMAMVVAQETPVVLLDEPTTYLDPAHAIDILKLAKDLASQGKTVIMVLHDLMLAGTYSDRL
VLLKAGEIVGQGSATEVLTQEKLAQCYGLRAEVWEDPRGQAPVIVPRGTIHLNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-52 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-45 46
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-45 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-45 46
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-45 46
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-46 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-44 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-45 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-45 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-45 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-45 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CULC0102_1680 YP_006495114.1 putative iron ABC transport system, ATP-binding protein BAC0164 Protein 1e-46 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CULC0102_1680 YP_006495114.1 putative iron ABC transport system, ATP-binding protein VFG0925 Protein 2e-45 45
CULC0102_1680 YP_006495114.1 putative iron ABC transport system, ATP-binding protein VFG1042 Protein 1e-46 44