Gene Information

Name : EHR_05020 (EHR_05020)
Accession : YP_006486853.1
Strain : Enterococcus hirae ATCC 9790
Genome accession: NC_018081
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease, ATP-binding protein ClpC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 951066 - 953546 bp
Length : 2481 bp
Strand : +
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGGAAGAACTTTTTACGCAAAGAGCACAATTAGTATTAGAAATTGCACAAGATGAAGCAAAAAAGTTTAAGCATCAGTC
TGTTAGTTCTGAGCATATTTTGTTGTCATTGGTTATTGAACCGAATGGAATTGCTGGGAAAGTACTACGTGAAGTTGGAT
TAACTGAAACAGACATCTACGAAGAGATTGAGCATTTGATTGGCTACGGTACAATGACTTCATATCCTCAAGGAACCTTT
TTACCTTATTCGCCACGCATGAAACAAATTTTTGCATTGGCAAATAGTGAAGTAAGAAAAATGGGTGCTCAAAAAGTGGG
AACGGAACATATCTTGTTGAGTATGCTAAGAGATGAAAGTATCATGGCTACTCGGATGATGATCAATTTGGGAATCAGTT
TAACGAAAGTCCGACAATCTTTGAAACAAAAAATGGGCATAAAAAATGATAGCCGTAATAATAGTATCCGTCGTAAAAAC
CCACAAGAAAAGCGTCAAATGGTAAAAGGTACTCCAACGTTAGATTCTTTAGCAAGAGATTTGACGAAGTTAGCGAGAGA
CGGAAAACTTGACCCAGTTGTTGGGCGTTCAAGAGAAGTAAAACGCTTGATTCAAATACTTAGTCGCCGAACTAAAAACA
ATCCTGTATTAGTAGGGGAACCTGGTGTTGGTAAGACAGCGATTGCTGAAGGTTTAGCCCAAAAAATCGTGATGGGTGAA
GTTCCTGAAGAGATGCAAGAAAAACGCTTGATGATGTTAGACATGGGGTCTTTAGTAGCGGGAACAAAATACCGTGGAGA
ATTTGAAGACCGTATGAAAAAGGTGATTGACGAAATCTATAACGACGGTCAAGTCATTTTATTTATTGATGAGTTGCATA
CCTTGATTGGTGCCGGTGGTGCAGAAGGGGCAATTGATGCATCTAATATTTTGAAACCTGCTTTAGCTCGTGGAGAATTA
CAGACGATTGGTGCTACAACGTTAGATGAATATCAAAAGTACATTGAAAAAGATTCTGCCCTTGAACGACGCTTTGCTCG
AATTCAAGTAGATGAACCGACACCTGAAGAAGCAGAAGAGATTTTACGTGGTCTTCGTTCAAGATATGAAGAGCATCATG
GTGTAGAAATCACTGATGATGCGATAAGAGCTGCGGTTCATCTTTCGGTACGCTATATCACTTCTCGTCAATTACCTGAC
AAAGCAATCGATTTGATTGATGAGTCAGCTGCTAAGGTACGCTTAGATAAAACAGATGATCTTTCGGAATCTACAGTAAT
TAAGTTGGAAATCGAACAATTAGTCAAAGAAAAAGAACGAGCAATCCAAAAACAAGACTTTGAAATAGCAGCACAATTGC
GAAGACAAGAAAAAGCATTACACAAAAAATTAGTAAAACTATTGATACTAGAAGAAAAGCAGGAAAATGGTTATGCTGAT
CGTGTGACTGAAGAAGATGTAGCCACAGTCGTTTCTGAATGGACAGGTGTTCCATTACAACAACTGGAAAAGAAAGAAAG
TCAGCGTTTATTGGAATTAGAAGCACTTTTACATGAACGTGTTGTTGGACAAGATGAAGCAGTCAAAGCAGTATCAAGAG
CAATTCGTCGGGCTCGTAGTGGGTTAAAAGATCCAAATCGACCAATTGGCTCCTTTATGTTCTTAGGACCTACAGGAGTT
GGTAAAACGGAACTTGCCAAAGCTTTATCGGAAGTGATGTTTGGGGACGAGAATTCCTTGATTCGGGTTGATATGTCTGA
ATTTATGGAAAAATACAGCACGAGTCGGTTGATTGGGTCACCTCCGGGCTATGTTGGGTATGATGAAGGTGGACAATTAA
CAGAAAAAATTCGACAAAAGCCCTACTCTGTCATCTTATTAGATGAAGTAGAAAAAGCCCATCCAGATGTATTTAATCTG
TTATTACAAGTACTAGACGATGGCCATTTAACAGACTCTAAAGGTCGGAAAGTTGATTTTAGAAATACGATCATGATTAT
GACTTCCAATATTGGTGCAACCCAAATTCGAGAAGAAAAAAACGTTGGCTTCAATGTCCAAGACATTACCAAAGATCATA
AAGCCATGCAAAAGCGTATTTTAGAAGAATTAAAGAAAACATTCCGTCCAGAGTTCTTGAACCGGATAGATGAAACAGTT
GTCTTCCATTCATTAAGCAAGGATGAAATCCATTCCATTGTTCAAATTATGAGTCGAGCAATCGTCAAACGTTTGAAAGA
ACAGGATATCCAAGTGAAGATCACTCCGGCAGCAATAGATGTGATCGGAAAAGCTGGTTTTGATCCTGAATATGGCGCTC
GTCCAATACGAAGAGCGTTGCAAAAAGAAATAGAAGATCGTTTAAGTGAAGCATTATTAGGTGGAGAAATCCATTTAGGC
GATCAAGTGACAGTGGGAGCCTCCAAAGGAAAAATCACTTTGAATGTACGTCTTCCAAAAAAGTATGTAGTTGAATCATA
G

Protein sequence :
MEELFTQRAQLVLEIAQDEAKKFKHQSVSSEHILLSLVIEPNGIAGKVLREVGLTETDIYEEIEHLIGYGTMTSYPQGTF
LPYSPRMKQIFALANSEVRKMGAQKVGTEHILLSMLRDESIMATRMMINLGISLTKVRQSLKQKMGIKNDSRNNSIRRKN
PQEKRQMVKGTPTLDSLARDLTKLARDGKLDPVVGRSREVKRLIQILSRRTKNNPVLVGEPGVGKTAIAEGLAQKIVMGE
VPEEMQEKRLMMLDMGSLVAGTKYRGEFEDRMKKVIDEIYNDGQVILFIDELHTLIGAGGAEGAIDASNILKPALARGEL
QTIGATTLDEYQKYIEKDSALERRFARIQVDEPTPEEAEEILRGLRSRYEEHHGVEITDDAIRAAVHLSVRYITSRQLPD
KAIDLIDESAAKVRLDKTDDLSESTVIKLEIEQLVKEKERAIQKQDFEIAAQLRRQEKALHKKLVKLLILEEKQENGYAD
RVTEEDVATVVSEWTGVPLQQLEKKESQRLLELEALLHERVVGQDEAVKAVSRAIRRARSGLKDPNRPIGSFMFLGPTGV
GKTELAKALSEVMFGDENSLIRVDMSEFMEKYSTSRLIGSPPGYVGYDEGGQLTEKIRQKPYSVILLDEVEKAHPDVFNL
LLQVLDDGHLTDSKGRKVDFRNTIMIMTSNIGATQIREEKNVGFNVQDITKDHKAMQKRILEELKKTFRPEFLNRIDETV
VFHSLSKDEIHSIVQIMSRAIVKRLKEQDIQVKITPAAIDVIGKAGFDPEYGARPIRRALQKEIEDRLSEALLGGEIHLG
DQVTVGASKGKITLNVRLPKKYVVES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 50
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-89 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EHR_05020 YP_006486853.1 ATP-dependent Clp protease, ATP-binding protein ClpC VFG0079 Protein 0.0 62
EHR_05020 YP_006486853.1 ATP-dependent Clp protease, ATP-binding protein ClpC VFG0080 Protein 4e-148 50