Gene Information

Name : smpB (EHR_08465)
Accession : YP_006487509.1
Strain : Enterococcus hirae ATCC 9790
Genome accession: NC_018081
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1675791 - 1676255 bp
Length : 465 bp
Strand : +
Note : COG0691 tmRNA-binding protein

DNA sequence :
ATGCCAAAAGGCGACGGAAAGTTAATCGCCCAAAATAAAAAGGCTCGCCATGATTATTCGATTATCGATACGATGGAAGC
AGGAATGGTGCTGCAAGGAACAGAAATCAAATCGATCCGAAACAGCCGAATCAATTTGAAAGATGGATTTGTCCGTATTC
GAAACGGTGAAGCATTTTTGCATAATGTTCATATCAGTCCCTATGAACAAGGCAATATTTTTAACCATGATCCGTTACGA
ACAAGAAAGTTACTATTACACAAAAAACAGATTTCACGGCTAGAGACTGAAACAAAAAATACCGGGGTCACGATCGTACC
CTTAAAAGTATATATTCGTGATGGGTATGCCAAAGTTTTGATTGGTCTTGCGAAAGGGAAGAAATCTTATGACAAGCGAG
AAGATCTAAAACGAAAAGATGTGGATCGTCAAATTGATCGAACATTAAAAAATTTCTCTAGATAA

Protein sequence :
MPKGDGKLIAQNKKARHDYSIIDTMEAGMVLQGTEIKSIRNSRINLKDGFVRIRNGEAFLHNVHISPYEQGNIFNHDPLR
TRKLLLHKKQISRLETETKNTGVTIVPLKVYIRDGYAKVLIGLAKGKKSYDKREDLKRKDVDRQIDRTLKNFSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 1e-42 60
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 2e-31 47
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 6e-25 44