Gene Information

Name : PADK2_03040 (PADK2_03040)
Accession : YP_006480603.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 655358 - 656467 bp
Length : 1110 bp
Strand : +
Note : COG3842 ABC-type spermidine/putrescine transport systems, ATPase components

DNA sequence : 
ATGGCCGAGACTCAAGGCGGCGATGTGCTGGTCAGCTTCCGTGGCGTGCAGAAAAGCTACGACGGCGAGACCCTCATCGT
GAAGGATCTCAACCTGGACATTCGCAAGGGCGAATTCCTCACCCTGCTCGGCCCCTCCGGGTCCGGCAAGACCACCAGCC
TGATGATGCTGGCCGGTTTCGAAACCCCCACCGCCGGCGAAATCCTCCTGGCCGGTCGCTCGATCAACAATGTCCCTCCG
CACAAGCGCGACATCGGCATGGTGTTCCAGAACTATGCGCTGTTCCCGCACATGACCGTGGCCGAGAACCTGGCCTTTCC
CCTCAGCGTCCGTGGCATGAGCAAGACCGACGTGAAGGAAAGGGTCAAGCGCGCGTTGTCGATGGTCCAGCTCGACGCCT
TCGCCGGGCGTTATCCGGCGCAGCTTTCCGGTGGCCAGCAGCAGCGCGTGGCGCTGGCCCGCGCGCTGGTCTTCGAGCCG
CAACTGGTGCTGATGGACGAGCCCCTGGGAGCGCTGGACAAGCAACTTCGCGAGCACATGCAGATGGAAATCAAGCATCT
GCACCAGCGCCTCGGCGTCACCGTGGTCTACGTCACCCACGACCAGGGCGAGGCGCTGACCATGTCCGACCGGGTGGCGG
TGTTCCACCAGGGCGAAATCCAGCAGATCGAGCCGCCGCGCAATCTCTACGAGCAGCCGCGCAACACCTTCGTGGCCAAC
TTCATCGGCGAGAACAACCGTCTATCCGGGCAGCTTCTCAGTTGCGACGGCGAGCGCTGCGTGGTCGGGCTGCCGCGCGG
CGAGAAGGTCGAGGCGCTGGCGGTCAACGTCGGCCAGCCGGGCGAGCCGGTGACCTTGTCGATCCGCCCCGAGCGGGTGC
GCCTGAACGGTGCCAGCGAGTCTTGCGTCAACCGTTTCTCCGGCCGCGTGGCCGAATTCGTCTACCTGGGCGACCACGTG
CGTGTGCGCCTGGAGGTCTGCGGCCGCGACGACTTCTTCGTCAAGCAGCCGATCGCCGAGCTGGACCCGACGCTGAGCGT
CGGTGATGTGGTTCCGCTGGGCTGGCAGGTCGAGCATGTGAGGGCGCTCGACCCTCTGCCGGCGGCGTGA

Protein sequence : 
MAETQGGDVLVSFRGVQKSYDGETLIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMMLAGFETPTAGEILLAGRSINNVPP
HKRDIGMVFQNYALFPHMTVAENLAFPLSVRGMSKTDVKERVKRALSMVQLDAFAGRYPAQLSGGQQQRVALARALVFEP
QLVLMDEPLGALDKQLREHMQMEIKHLHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIEPPRNLYEQPRNTFVAN
FIGENNRLSGQLLSCDGERCVVGLPRGEKVEALAVNVGQPGEPVTLSIRPERVRLNGASESCVNRFSGRVAEFVYLGDHV
RVRLEVCGRDDFFVKQPIAELDPTLSVGDVVPLGWQVEHVRALDPLPAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-37 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_03040 YP_006480603.1 ABC transporter ATP-binding protein VFG1206 Protein 6e-41 43