Gene Information

Name : PADK2_28295 (PADK2_28295)
Accession : YP_006485622.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6119075 - 6120568 bp
Length : 1494 bp
Strand : -
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGACCACCCTGACCCGCGCCGACTGGGAAGCCCGCGCCAAAGACCTGAAGATCGAAGGCCGTGCCTTCGTCAACGGCGA
ATACAGCAACGCCGCCTCCGGCGAGACCTTCGACTGCCTGAGCCCGGTGGATGGCCGCTTCCTGGCCAAGGTCGCCAGTT
GCGACCTGGCCGATGCCGAGCAGGCGGTCAAGGTCGCCCGCAATGCCTTCGATTCCGGCGCCTGGTCGCGCCTGGCGCCG
GCCAAGCGCAAGCAGACGATGATCCGCTTCGCCGATCTGCTGCTGGAGAACGCCGAGGAGCTGGCCCTGCTGGAAACCCT
GGACATGGGCAAGCCGATCAGCGACTCGCTGCACATCGACGTCGCCAGCGCCGCCAACAGCCTGCGCTGGAGCGCCGAGG
CGATCGACAAGATCTATGACGAAGTCGCCGCCACTCCCCATGCCGAGCTGGGCCTGGTGACCCGCGAGCCGGTCGGCGTG
GTCGCCGCCATCGTGCCGTGGAACTTCCCGCTGCTGATGTCCTGCTGGAAACTCGGTCCGGCCCTGGCCACCGGCAACTC
GGTGATCCTCAAGCCCTCCGAGAAGTCGCCGCTGACCGCCATCCGCATCGCCCAGCTGGCCGTCGAGGCCGGCATTCCGA
AAGGCGTGTTCAACGTGCTGCCGGGCTATGGCCACACGGTAGGCAAGGCGCTGGCATTGCACATGGATGTCGACACCCTG
GTGTTCACCGGTTCGACCAAGATCGCCAAGCAACTGATGGTCTATGCCGGCGAGTCGAACATGAAGCGCGTCTGGCTGGA
GGCCGGCGGCAAGAGCCCGAACATCGTCTTCGCCGACGCCCCGGACCTGAAGGCCGCCGCCGAAGCCGCTGCCGGCGCCA
TCGCCTTCAACCAGGGCGAAGTCTGCACCGCCGGTTCGCGCCTGCTGGTGGAGCGCTCCATCAAGGACAAGTTCCTGCCC
CTGGTGATCGAGGCCCTCAAGGGCTGGAAACCGGGCAACCCGCTGGATCCGGAAACCAACGTCGGCGCGCTGGTGGACAC
CCAGCAGATGAACACCGTGCTGTCCTACATCGAGGCCGGTCACAACGACGGCGCCAAGCTGGTCGCCGGCGGCAAGCGGA
CCCTGGAAGAAACCGGCGGCACCTACGTCGAGCCGACCATCTTCGACGGCGTGACCAATGCGATGAAGATCGCCCGCGAG
GAAATCTTCGGCCCGGTGCTCTCGGTGATCGAGTTCGAGGATGCCGAGGAAGCCGTGCGCATCGCCAACGACACGCCCTA
TGGGCTGGCGGCGGCGGTCTGGACCAGCAACCTGTCCAAGGCGCACCTGACTGCCAAGGCCCTGCGCGCCGGCAGCGTCT
GGGTCAACCAGTACGACGGCGGCGACATGACCGCTCCGTTCGGCGGCTTCAAGCAGTCGGGCAACGGTCGCGACAAGTCG
CTGCACGCCTTCGACAAGTACACCGAGCTGAAGGCGACCTGGATCAAGCTCTGA

Protein sequence :
MTTLTRADWEARAKDLKIEGRAFVNGEYSNAASGETFDCLSPVDGRFLAKVASCDLADAEQAVKVARNAFDSGAWSRLAP
AKRKQTMIRFADLLLENAEELALLETLDMGKPISDSLHIDVASAANSLRWSAEAIDKIYDEVAATPHAELGLVTREPVGV
VAAIVPWNFPLLMSCWKLGPALATGNSVILKPSEKSPLTAIRIAQLAVEAGIPKGVFNVLPGYGHTVGKALALHMDVDTL
VFTGSTKIAKQLMVYAGESNMKRVWLEAGGKSPNIVFADAPDLKAAAEAAAGAIAFNQGEVCTAGSRLLVERSIKDKFLP
LVIEALKGWKPGNPLDPETNVGALVDTQQMNTVLSYIEAGHNDGAKLVAGGKRTLEETGGTYVEPTIFDGVTNAMKIARE
EIFGPVLSVIEFEDAEEAVRIANDTPYGLAAAVWTSNLSKAHLTAKALRAGSVWVNQYDGGDMTAPFGGFKQSGNGRDKS
LHAFDKYTELKATWIKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-124 59
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-71 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-72 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-72 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-72 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-71 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_28295 YP_006485622.1 aldehyde dehydrogenase VFG0082 Protein 9e-72 41